# cmstat :: display summary statistics for CMs # INFERNAL 1.1.1 (July 2014) # Copyright (C) 2014 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # rel entropy # ------------ # idx name accession nseq eff_nseq clen W bps bifs model cm hmm # ---- -------------------- --------- -------- -------- ----- ----- ---- ---- ----- ----- ----- 1 5S_rRNA RF00001 712 7.35 119 194 34 1 cm 0.590 0.370 2 5_8S_rRNA RF00002 61 3.62 154 203 25 3 cm 0.590 0.471 3 U1 RF00003 100 4.43 166 197 40 3 cm 0.590 0.390 4 U2 RF00004 208 5.46 193 229 45 4 cm 0.590 0.398 5 tRNA RF00005 954 67.04 71 259 21 2 cm 0.793 0.453 6 Vault RF00006 73 4.46 101 302 19 0 cm 0.590 0.469 7 U12 RF00007 62 3.36 155 364 42 3 cm 0.590 0.374 8 Hammerhead_3 RF00008 82 8.62 58 293 15 1 cm 0.961 0.722 9 RNaseP_nuc RF00009 116 17.03 303 1005 55 4 cm 0.590 0.435 10 RNaseP_bact_a RF00010 458 3.18 367 723 102 7 cm 0.590 0.354 11 RNaseP_bact_b RF00011 114 1.81 366 483 97 9 cm 0.590 0.344 12 U3 RF00012 87 5.45 218 271 63 3 cm 0.590 0.382 13 6S RF00013 149 26.30 188 260 49 0 cm 0.590 0.407 14 DsrA RF00014 5 1.25 85 103 29 2 cm 0.669 0.371 15 U4 RF00015 170 4.58 140 435 31 3 cm 0.590 0.406 16 SNORD14 RF00016 18 2.53 116 176 11 0 cm 0.590 0.495 17 Metazoa_SRP RF00017 91 3.22 301 417 120 4 cm 0.590 0.256 18 CsrB RF00018 38 2.18 356 425 54 11 cm 0.590 0.466 19 Y_RNA RF00019 104 4.12 98 197 23 0 cm 0.590 0.439 20 U5 RF00020 180 6.52 116 290 30 1 cm 0.590 0.380 21 Spot_42 RF00021 19 1.18 115 139 37 2 cm 0.590 0.304 22 GcvB RF00022 27 3.13 198 322 47 4 cm 0.590 0.393 23 tmRNA RF00023 477 48.89 354 1294 94 5 cm 0.590 0.417 24 Telomerase-vert RF00024 37 3.33 436 632 98 3 cm 0.590 0.400 25 Telomerase-cil RF00025 20 4.97 178 258 39 2 cm 0.590 0.392 26 U6 RF00026 188 3.77 104 449 5 0 cm 0.590 0.549 27 let-7 RF00027 63 3.53 84 109 31 0 cm 0.676 0.426 28 Intron_gpI RF00028 12 9.08 251 1331 55 5 cm 0.590 0.434 29 Intron_gpII RF00029 92 13.00 93 512 19 1 cm 0.614 0.464 30 RNase_MRP RF00030 66 10.33 266 1868 67 4 cm 0.590 0.385 31 SECIS_1 RF00031 61 61.00 64 102 18 0 cm 0.716 0.432 32 Histone3 RF00032 46 46.00 46 57 6 0 cm 0.699 0.604 33 MicF RF00033 4 1.34 94 113 16 1 cm 0.607 0.449 34 RprA RF00034 13 2.38 108 129 18 3 cm 0.590 0.471 35 OxyS RF00035 5 0.85 110 132 26 2 cm 0.591 0.367 36 RRE RF00036 65 0.63 337 358 116 4 cm 0.590 0.261 37 IRE_I RF00037 62 62.00 36 47 15 0 cm 1.436 1.212 38 PrfA RF00038 11 1.38 132 151 14 0 cm 0.589 0.497 39 DicF RF00039 5 5.00 52 79 11 0 cm 1.062 0.968 40 rne5 RF00040 6 1.63 334 712 84 4 cm 0.590 0.373 41 Entero_OriR RF00041 60 1.09 121 141 29 2 cm 0.589 0.377 42 CopA RF00042 37 1.66 92 109 25 1 cm 0.619 0.397 43 Plasmid_R1162 RF00043 8 1.86 75 92 21 1 cm 0.753 0.529 44 Phage_pRNA RF00044 3 0.99 244 265 43 5 cm 0.591 0.430 45 SNORA73 RF00045 66 2.58 219 245 50 2 cm 0.590 0.420 46 snoR30 RF00046 6 1.49 96 114 4 0 cm 0.595 0.561 47 mir-2 RF00047 56 6.03 72 95 21 0 cm 0.783 0.645 48 Entero_CRE RF00048 56 3.23 61 76 12 0 cm 0.916 0.801 49 SNORD36 RF00049 59 8.13 77 103 4 0 cm 0.734 0.693 50 FMN RF00050 144 2.03 140 293 23 3 cm 0.590 0.456 51 mir-17 RF00051 54 2.24 82 99 25 0 cm 0.692 0.460 52 lin-4 RF00052 12 2.83 71 89 22 0 cm 0.793 0.574 53 mir-7 RF00053 57 2.58 88 111 28 0 cm 0.647 0.408 54 SNORD25 RF00054 12 3.17 87 105 5 0 cm 0.654 0.614 55 SNORD96 RF00055 9 3.46 85 186 5 0 cm 0.669 0.612 56 SNORA71 RF00056 40 1.72 134 153 39 1 cm 0.589 0.355 57 RyhB RF00057 26 3.24 67 85 13 1 cm 0.838 0.687 58 HgcF RF00058 4 0.88 168 191 38 2 cm 0.589 0.385 59 TPP RF00059 109 4.05 105 327 28 2 cm 0.590 0.394 60 HgcE RF00060 4 1.22 130 149 20 0 cm 0.591 0.464 61 IRES_HCV RF00061 79 1.02 255 424 77 6 cm 0.591 0.316 62 HgcC RF00062 5 1.62 130 354 27 2 cm 0.590 0.412 63 SscA RF00063 5 1.37 96 112 17 0 cm 0.597 0.442 64 HgcG RF00064 5 1.51 276 331 57 3 cm 0.590 0.409 65 snoR9 RF00065 5 1.20 128 146 18 0 cm 0.589 0.471 66 U7 RF00066 49 10.75 63 82 11 0 cm 0.889 0.745 67 SNORD15 RF00067 11 3.33 145 187 4 0 cm 0.590 0.574 68 SNORD21 RF00068 5 1.99 95 113 4 0 cm 0.602 0.566 69 SNORD24 RF00069 14 3.61 76 148 4 0 cm 0.744 0.697 70 SNORD29 RF00070 10 3.55 65 166 3 0 cm 0.862 0.824 71 SNORD73 RF00071 25 2.76 72 110 4 0 cm 0.783 0.739 72 SNORA75 RF00072 6 1.54 134 166 28 1 cm 0.591 0.415 73 mir-156 RF00073 10 1.82 88 129 24 0 cm 0.647 0.431 74 mir-29 RF00074 10 2.64 71 87 21 0 cm 0.793 0.598 75 mir-166 RF00075 31 6.20 126 556 22 0 cm 0.590 0.507 76 mir-181 RF00076 19 1.75 76 99 24 0 cm 0.744 0.492 77 SraB RF00077 5 1.06 169 188 37 3 cm 0.589 0.385 78 MicA RF00078 17 1.91 75 107 14 1 cm 0.752 0.600 79 OmrA-B RF00079 23 1.54 87 121 20 1 cm 0.655 0.452 80 yybP-ykoY RF00080 29 29.00 175 524 25 2 cm 0.559 0.429 81 ArcZ RF00081 9 1.68 106 128 15 1 cm 0.590 0.476 82 SraG RF00082 7 1.71 177 205 28 2 cm 0.590 0.461 83 GlmZ_SraJ RF00083 21 1.29 212 275 50 4 cm 0.590 0.382 84 CsrC RF00084 4 1.05 255 277 59 8 cm 0.590 0.389 85 SNORD28 RF00085 20 3.43 77 116 4 0 cm 0.734 0.699 86 SNORD27 RF00086 8 2.93 71 95 4 0 cm 0.793 0.742 87 SNORD26 RF00087 17 2.55 76 94 4 0 cm 0.744 0.706 88 SNORD30 RF00088 20 2.98 70 94 9 0 cm 0.804 0.725 89 SNORD31 RF00089 26 4.12 69 88 2 0 cm 0.815 0.785 90 SNORA74 RF00090 24 1.58 201 222 67 2 cm 0.590 0.316 91 SNORA62 RF00091 18 1.64 156 177 25 1 cm 0.590 0.453 92 SNORA63 RF00092 8 1.42 130 149 23 1 cm 0.589 0.437 93 SNORD18 RF00093 16 5.31 73 198 4 0 cm 0.773 0.745 94 HDV_ribozyme RF00094 33 1.58 91 115 22 1 cm 0.628 0.408 95 snoPyro_CD RF00095 25 25.00 58 79 3 0 cm 0.944 0.902 96 U8 RF00096 55 3.66 135 162 24 2 cm 0.590 0.456 97 snoR71 RF00097 25 2.55 107 124 8 0 cm 0.590 0.537 98 SNORD22 RF00099 49 2.24 126 150 4 0 cm 0.591 0.564 99 7SK RF00100 45 3.02 330 414 87 4 cm 0.590 0.387 100 SraC_RyeA RF00101 13 1.17 145 165 23 3 cm 0.589 0.450 101 VA RF00102 54 1.92 159 218 45 1 cm 0.590 0.371 102 mir-1 RF00103 66 3.73 77 96 23 0 cm 0.734 0.561 103 mir-10 RF00104 36 7.48 75 90 24 0 cm 0.753 0.593 104 SNORD115 RF00105 32 1.89 82 100 8 0 cm 0.692 0.623 105 RNAI RF00106 10 1.18 102 122 36 2 cm 0.589 0.277 106 FinP RF00107 6 1.22 79 95 24 1 cm 0.716 0.455 107 SNORD116 RF00108 48 2.11 92 129 13 0 cm 0.620 0.510 108 Vimentin3 RF00109 19 4.12 67 137 18 1 cm 0.838 0.688 109 RybB RF00110 8 1.72 79 96 12 0 cm 0.718 0.580 110 RyeB RF00111 17 1.71 100 123 20 2 cm 0.590 0.416 111 CyaR_RyeE RF00112 17 1.93 85 111 15 1 cm 0.669 0.523 112 SIB_RNA RF00113 17 1.81 147 171 24 2 cm 0.590 0.457 113 S15 RF00114 78 7.98 117 167 13 1 cm 0.590 0.524 114 IS061 RF00115 8 0.99 180 200 36 4 cm 0.590 0.412 115 C0465 RF00116 8 1.06 78 95 23 2 cm 0.724 0.460 116 C0719 RF00117 9 1.02 222 242 32 3 cm 0.590 0.461 117 rydB RF00118 7 2.77 62 90 12 1 cm 0.902 0.790 118 C0299 RF00119 5 1.17 79 96 20 1 cm 0.718 0.497 119 MicC RF00121 8 1.80 123 149 23 2 cm 0.590 0.445 120 GadY RF00122 5 0.82 114 132 28 2 cm 0.590 0.362 121 IS102 RF00124 5 1.05 206 226 35 3 cm 0.592 0.443 122 IS128 RF00125 5 0.96 209 232 52 3 cm 0.589 0.359 123 ryfA RF00126 9 1.37 296 334 83 8 cm 0.589 0.356 124 t44 RF00127 78 2.55 97 184 22 0 cm 0.590 0.404 125 GlmY_tke1 RF00128 17 1.62 163 188 38 2 cm 0.590 0.391 126 mir-103 RF00129 28 1.65 78 94 18 0 cm 0.726 0.539 127 mir-192 RF00130 41 2.46 106 133 28 0 cm 0.590 0.399 128 mir-30 RF00131 49 3.91 60 81 21 0 cm 0.930 0.713 129 snoR24 RF00132 12 1.65 97 114 3 0 cm 0.591 0.563 130 SNORD33 RF00133 72 5.30 85 117 6 0 cm 0.669 0.603 131 snoZ196 RF00134 22 3.64 85 122 7 0 cm 0.669 0.596 132 snoZ223 RF00135 5 1.51 94 112 7 0 cm 0.609 0.554 133 SNORD81 RF00136 22 2.78 77 120 7 0 cm 0.734 0.655 134 SNORD83 RF00137 7 1.74 78 94 8 0 cm 0.726 0.645 135 SNORD16 RF00138 5 1.23 100 117 19 0 cm 0.591 0.423 136 SNORA72 RF00139 29 1.55 132 152 30 1 cm 0.590 0.402 137 Alpha_RBS RF00140 39 3.38 110 136 10 0 cm 0.590 0.515 138 snoZ118 RF00142 7 1.35 108 126 13 0 cm 0.589 0.485 139 mir-6 RF00143 24 3.22 77 110 24 0 cm 0.735 0.556 140 mir-199 RF00144 40 1.58 102 119 30 0 cm 0.590 0.346 141 snoZ105 RF00145 11 5.67 72 96 7 0 cm 0.783 0.736 142 SNORD34 RF00147 14 2.99 80 112 6 0 cm 0.708 0.641 143 snoZ103 RF00149 12 1.97 100 125 5 0 cm 0.590 0.541 144 SNORD42 RF00150 7 2.77 68 103 5 0 cm 0.826 0.768 145 SNORD58 RF00151 33 3.71 65 102 4 0 cm 0.863 0.817 146 SNORD79 RF00152 28 2.82 83 104 7 0 cm 0.684 0.622 147 SNORD62 RF00153 14 1.81 86 104 4 0 cm 0.661 0.621 148 SNORD63 RF00154 23 2.80 70 98 4 0 cm 0.804 0.770 149 SNORA66 RF00155 25 1.58 133 158 23 1 cm 0.591 0.442 150 SNORA70 RF00156 43 2.08 135 155 21 1 cm 0.590 0.462 151 SNORD39 RF00157 20 2.25 80 104 4 0 cm 0.708 0.673 152 SNORD82 RF00158 27 2.87 70 89 5 0 cm 0.804 0.760 153 snoZ168 RF00159 6 1.66 82 101 4 0 cm 0.691 0.655 154 snoZ159 RF00160 10 1.82 87 159 4 0 cm 0.655 0.619 155 nos_TCE RF00161 9 2.36 64 80 21 1 cm 0.875 0.630 156 SAM RF00162 433 2.33 108 272 27 2 cm 0.590 0.387 157 Hammerhead_1 RF00163 29 29.00 46 953 14 1 cm 1.196 1.008 158 s2m RF00164 38 7.99 43 57 12 0 cm 1.276 1.096 159 Corona_pk3 RF00165 14 5.77 61 78 10 0 cm 0.916 0.797 160 PrrB_RsmZ RF00166 37 1.70 133 156 34 4 cm 0.590 0.364 161 Purine RF00167 133 3.84 102 118 22 1 cm 0.590 0.410 162 Lysine RF00168 47 5.09 183 408 53 3 cm 0.590 0.363 163 Bacteria_small_SRP RF00169 261 5.57 97 114 33 0 cm 0.590 0.314 164 msr RF00170 9 6.36 72 123 15 0 cm 0.783 0.664 165 Tombus_5 RF00171 9 1.44 166 206 34 3 cm 0.590 0.407 166 CAESAR RF00172 9 2.12 80 102 12 1 cm 0.708 0.595 167 Hairpin RF00173 5 3.07 52 67 8 0 cm 1.066 0.956 168 Cobalamin RF00174 430 6.66 191 460 42 3 cm 0.590 0.421 169 HIV-1_DIS RF00175 70 8.97 40 54 11 0 cm 1.367 1.251 170 Tombus_3_IV RF00176 18 0.98 92 110 22 2 cm 0.620 0.408 171 SSU_rRNA_bacteria RF00177 99 1.21 1533 1614 462 31 cm 0.590 0.316 172 mir-24 RF00178 17 2.43 68 86 16 0 cm 0.827 0.668 173 GAIT RF00179 8 1.27 71 87 18 0 cm 0.793 0.564 174 REN-SRE RF00180 13 7.75 37 50 6 0 cm 1.472 1.397 175 SNORD113 RF00181 59 9.32 75 178 5 0 cm 0.753 0.716 176 Corona_package RF00182 3 1.04 129 148 30 0 cm 0.590 0.374 177 G-CSF_SLDE RF00183 16 1.45 96 113 26 2 cm 0.596 0.371 178 PVX_3 RF00184 4 2.15 54 70 8 1 cm 1.027 0.924 179 Flavi_CRE RF00185 84 2.50 96 127 24 1 cm 0.596 0.377 180 SNORD101 RF00186 26 2.26 73 94 5 0 cm 0.772 0.716 181 SNORD102 RF00187 11 2.00 72 90 5 0 cm 0.783 0.728 182 SNORD103 RF00188 41 2.30 83 106 6 0 cm 0.684 0.631 183 SNORD95 RF00189 7 1.92 68 85 4 0 cm 0.826 0.787 184 SNORA16 RF00190 29 3.18 135 162 22 1 cm 0.590 0.467 185 SNORA57 RF00191 26 1.61 148 167 28 1 cm 0.590 0.432 186 BLV_package RF00192 5 2.14 55 71 12 1 cm 1.009 0.869 187 CTV_rep_sig RF00193 9 0.75 273 295 73 9 cm 0.590 0.340 188 Rubella_3 RF00194 25 1.42 68 84 20 1 cm 0.827 0.597 189 RsmY RF00195 11 1.51 121 143 19 2 cm 0.590 0.466 190 AMV_RNA1_SL RF00196 6 5.87 35 48 12 0 cm 1.551 1.443 191 SL1 RF00198 28 0.99 103 122 24 2 cm 0.590 0.375 192 SL2 RF00199 30 1.72 110 134 28 2 cm 0.590 0.394 193 snoZ199 RF00200 17 1.82 84 138 10 0 cm 0.676 0.572 194 snoZ278 RF00201 7 1.15 115 132 8 0 cm 0.592 0.531 195 snoR66 RF00202 6 1.70 76 93 6 0 cm 0.744 0.676 196 snoR160 RF00203 9 2.70 80 110 5 0 cm 0.708 0.661 197 snoR12 RF00204 9 1.87 83 109 5 0 cm 0.683 0.622 198 snoR41 RF00205 7 1.32 97 127 6 0 cm 0.589 0.535 199 U54 RF00206 21 3.71 81 123 5 0 cm 0.700 0.665 200 K10_TLS RF00207 5 2.73 44 58 17 0 cm 1.250 0.987 201 snoR72 RF00208 5 1.14 87 104 9 0 cm 0.655 0.560 202 IRES_Pesti RF00209 25 0.89 274 297 75 6 cm 0.590 0.330 203 IRES_Picorna_2 RF00210 92 2.07 462 527 122 9 cm 0.590 0.354 204 SNORD35 RF00211 8 2.34 88 119 4 0 cm 0.647 0.605 205 SNORD38 RF00212 7 2.29 70 87 8 0 cm 0.803 0.714 206 snoR38 RF00213 19 4.46 91 183 7 0 cm 0.627 0.569 207 Retro_dr1 RF00214 26 1.21 90 108 22 1 cm 0.632 0.437 208 Tombus_3_III RF00215 28 3.84 70 86 14 1 cm 0.804 0.682 209 IRES_c-myc RF00216 23 0.85 302 325 62 3 cm 0.590 0.406 210 SNORD20 RF00217 13 1.78 80 98 4 0 cm 0.708 0.669 211 SNORD46 RF00218 5 1.30 104 123 6 0 cm 0.589 0.547 212 Rhino_CRE RF00220 12 1.42 86 103 21 0 cm 0.662 0.476 213 SNORD43 RF00221 4 2.21 64 80 4 0 cm 0.875 0.821 214 IRES_Bag1 RF00222 15 1.81 370 393 52 4 cm 0.590 0.485 215 IRES_Bip RF00223 9 1.71 263 311 33 1 cm 0.589 0.495 216 IRES_FGF2 RF00224 6 1.02 498 522 96 5 cm 0.589 0.424 217 IRES_Tobamo RF00225 7 1.16 151 170 26 2 cm 0.591 0.446 218 IRES_n-myc RF00226 6 1.66 322 352 36 5 cm 0.589 0.497 219 FIE3 RF00227 5 4.19 65 180 9 0 cm 0.863 0.801 220 IRES_HepA RF00228 23 0.98 572 595 102 8 cm 0.590 0.429 221 IRES_Picorna RF00229 92 1.19 252 272 61 4 cm 0.590 0.379 222 T-box RF00230 48 5.50 224 922 47 4 cm 0.590 0.416 223 SCARNA13 RF00231 24 1.71 275 296 62 3 cm 0.591 0.405 224 Spi-1 RF00232 5 0.78 168 188 53 3 cm 0.589 0.307 225 Tymo_tRNA-like RF00233 28 2.28 84 103 20 3 cm 0.676 0.459 226 glmS RF00234 18 2.34 171 352 38 3 cm 0.590 0.384 227 Plasmid_RNAIII RF00235 7 0.82 131 149 41 3 cm 0.591 0.290 228 ctRNA_pGA1 RF00236 15 2.03 79 101 24 1 cm 0.717 0.469 229 mir-9 RF00237 43 4.50 62 77 19 0 cm 0.902 0.750 230 ctRNA_pND324 RF00238 48 2.41 86 104 23 1 cm 0.662 0.462 231 mir-124 RF00239 56 3.45 81 105 21 0 cm 0.700 0.526 232 RNA-OUT RF00240 16 1.89 70 99 20 0 cm 0.803 0.582 233 mir-8 RF00241 13 5.23 76 100 21 0 cm 0.744 0.583 234 ctRNA_pT181 RF00242 16 1.57 94 119 20 1 cm 0.607 0.421 235 traJ_5 RF00243 6 1.01 109 127 27 2 cm 0.590 0.379 236 mir-26 RF00244 5 2.40 74 90 18 0 cm 0.763 0.594 237 mir-19 RF00245 46 1.94 76 103 22 0 cm 0.744 0.512 238 mir-135 RF00246 32 1.94 90 107 28 0 cm 0.634 0.402 239 mir-160 RF00247 7 2.00 90 328 25 0 cm 0.633 0.428 240 mir-148 RF00248 5 1.51 87 104 26 0 cm 0.653 0.395 241 mir-46 RF00249 11 2.58 74 93 22 0 cm 0.763 0.561 242 mir-TAR RF00250 45 2.58 61 76 24 0 cm 0.916 0.636 243 mir-219 RF00251 13 2.43 71 97 17 0 cm 0.793 0.631 244 Alfamo_CPB RF00252 18 0.94 182 202 56 6 cm 0.589 0.295 245 mir-101 RF00253 24 1.71 75 91 23 0 cm 0.753 0.508 246 mir-16 RF00254 12 2.31 81 97 19 0 cm 0.700 0.535 247 mir-218 RF00255 18 1.27 96 115 28 0 cm 0.595 0.336 248 mir-196 RF00256 14 1.79 92 108 27 0 cm 0.620 0.397 249 mir-194 RF00257 29 2.13 85 103 28 0 cm 0.669 0.414 250 mir-130 RF00258 9 1.34 83 100 26 0 cm 0.685 0.421 251 IFN_gamma RF00259 5 0.96 169 188 49 2 cm 0.590 0.332 252 HepC_CRE RF00260 52 3.20 51 65 14 0 cm 1.085 0.924 253 IRES_L-myc RF00261 11 0.89 221 243 71 5 cm 0.590 0.314 254 sar RF00262 4 1.95 68 84 20 1 cm 0.826 0.597 255 SNORA68 RF00263 26 2.05 133 153 36 1 cm 0.590 0.373 256 SNORA64 RF00264 9 1.66 134 159 37 1 cm 0.590 0.382 257 SNORA69 RF00265 16 1.26 132 156 38 1 cm 0.589 0.343 258 snoZ17 RF00266 26 2.90 71 89 6 0 cm 0.793 0.742 259 snoR64 RF00267 14 2.28 94 123 11 0 cm 0.607 0.508 260 snoZ7 RF00268 5 1.64 78 96 2 0 cm 0.726 0.707 261 SNORD61 RF00270 36 6.76 72 108 2 0 cm 0.783 0.759 262 SNORD60 RF00271 22 2.15 83 109 9 0 cm 0.684 0.599 263 SNORA67 RF00272 12 1.69 143 171 33 1 cm 0.590 0.426 264 SNORD59 RF00273 24 2.91 73 95 4 0 cm 0.772 0.732 265 SNORD57 RF00274 23 3.10 72 99 3 0 cm 0.783 0.746 266 SNORD56 RF00275 7 2.47 71 86 7 0 cm 0.793 0.730 267 SNORD52 RF00276 20 3.63 67 85 3 0 cm 0.838 0.803 268 SNORD49 RF00277 28 4.28 71 151 0 0 hmm - 0.794 269 SNORD50 RF00278 26 2.60 72 90 3 0 cm 0.782 0.751 270 SNORD45 RF00279 11 2.45 81 101 4 0 cm 0.700 0.664 271 SNORD51 RF00280 14 1.96 79 96 4 0 cm 0.716 0.672 272 SNORD47 RF00281 20 2.34 77 95 4 0 cm 0.734 0.695 273 SNORD48 RF00282 8 2.14 63 80 2 0 cm 0.889 0.861 274 SCARNA18 RF00283 20 1.76 83 100 8 0 cm 0.683 0.603 275 SNORD74 RF00284 22 2.43 80 97 5 0 cm 0.708 0.659 276 snoZ6 RF00285 7 1.32 91 109 4 0 cm 0.627 0.593 277 SCARNA8 RF00286 22 1.36 131 150 28 1 cm 0.590 0.408 278 SNORD44 RF00287 12 2.85 61 78 2 0 cm 0.916 0.892 279 snoZ30 RF00288 20 1.75 97 118 7 0 cm 0.589 0.529 280 SNORND104 RF00289 18 2.27 70 87 2 0 cm 0.804 0.787 281 BaMV_CRE RF00290 5 0.83 140 159 30 3 cm 0.591 0.391 282 snoR639 RF00291 9 1.32 140 162 23 1 cm 0.591 0.446 283 snoTBR5 RF00292 6 1.53 94 113 2 0 cm 0.607 0.590 284 snoM1 RF00293 7 1.24 99 123 18 1 cm 0.590 0.431 285 snoTBR17 RF00294 6 1.74 119 151 2 0 cm 0.589 0.578 286 snoTBR7 RF00295 10 2.29 76 93 3 0 cm 0.745 0.709 287 snoR16 RF00296 18 2.54 86 112 5 0 cm 0.661 0.624 288 snoZ221_snoR21b RF00300 12 2.14 91 205 4 0 cm 0.627 0.591 289 snoZ256 RF00301 5 1.47 94 112 5 0 cm 0.609 0.566 290 SNORA65 RF00302 14 1.76 127 148 32 1 cm 0.590 0.381 291 snoR86 RF00303 11 1.54 123 151 19 2 cm 0.590 0.466 292 snoZ279_R105_R108 RF00304 20 1.60 106 131 26 1 cm 0.589 0.391 293 snoZ248 RF00305 5 0.86 137 155 26 1 cm 0.591 0.423 294 snoZ178 RF00306 5 0.95 152 169 25 0 cm 0.590 0.445 295 snoR98 RF00307 4 1.19 117 136 24 1 cm 0.589 0.408 296 snosnR60_Z15 RF00309 23 3.02 98 146 5 0 cm 0.590 0.543 297 snoZ165 RF00310 5 1.25 92 110 3 0 cm 0.620 0.587 298 snoZ188 RF00311 21 1.93 123 143 6 0 cm 0.590 0.556 299 snoZ206 RF00312 6 1.25 129 153 5 0 cm 0.590 0.559 300 snoZ173 RF00313 4 1.05 107 126 7 0 cm 0.592 0.533 301 snoZ182 RF00314 6 1.22 92 109 6 0 cm 0.619 0.566 302 snoJ33 RF00315 5 1.87 81 98 6 0 cm 0.700 0.641 303 snoR43 RF00316 16 2.04 73 90 7 0 cm 0.772 0.697 304 snoZ163 RF00317 7 1.56 90 120 5 0 cm 0.632 0.588 305 snoZ175 RF00318 6 1.38 81 99 3 0 cm 0.699 0.670 306 SNORA23 RF00319 9 1.17 184 204 45 1 cm 0.591 0.366 307 snoZ185 RF00320 5 1.33 86 104 6 0 cm 0.659 0.604 308 snoZ247 RF00321 8 1.82 139 158 11 0 cm 0.590 0.526 309 SNORA31 RF00322 5 1.01 130 148 38 1 cm 0.591 0.333 310 snoR79 RF00323 5 1.61 65 82 5 0 cm 0.863 0.805 311 snoMBII-202 RF00324 30 3.42 84 116 5 0 cm 0.676 0.630 312 SNORD53_SNORD92 RF00325 37 3.10 78 117 4 0 cm 0.725 0.682 313 snoZ155 RF00326 8 2.22 81 98 6 0 cm 0.700 0.641 314 snoZ194 RF00327 5 0.91 108 126 19 1 cm 0.589 0.424 315 snoZ161_228 RF00328 11 2.66 93 115 7 0 cm 0.614 0.552 316 snoZ162 RF00329 9 1.55 88 110 13 0 cm 0.646 0.525 317 snoZ43 RF00330 7 1.47 100 123 7 0 cm 0.591 0.531 318 snoZ169 RF00331 3 1.80 69 87 6 0 cm 0.816 0.745 319 snoZ266 RF00332 11 1.93 90 129 10 0 cm 0.634 0.533 320 snoZ157 RF00333 10 1.43 100 119 18 0 cm 0.591 0.425 321 SNORA3 RF00334 6 1.13 131 150 40 1 cm 0.589 0.315 322 snoZ13_snr52 RF00335 42 2.27 101 142 7 0 cm 0.590 0.538 323 snoJ26 RF00336 5 1.11 147 177 14 0 cm 0.591 0.504 324 snoZ112 RF00337 6 1.07 184 208 30 0 cm 0.590 0.440 325 snoR53 RF00338 5 1.17 91 113 11 0 cm 0.625 0.519 326 snoR60 RF00339 10 2.09 72 92 4 0 cm 0.783 0.744 327 SNORA36 RF00340 6 0.98 132 150 34 1 cm 0.590 0.350 328 snoZ39 RF00341 5 2.02 63 79 15 0 cm 0.890 0.705 329 snoZ40 RF00342 5 1.56 73 90 5 0 cm 0.774 0.715 330 snoZ122 RF00343 23 3.61 94 162 7 0 cm 0.608 0.558 331 snoZ267 RF00344 5 2.04 73 98 6 0 cm 0.773 0.710 332 snoR1 RF00345 13 2.25 93 129 2 0 cm 0.614 0.596 333 snoR9_plant RF00348 7 1.45 129 148 3 0 cm 0.589 0.569 334 snoR11 RF00349 5 1.45 90 116 5 0 cm 0.632 0.585 335 snoZ152 RF00350 9 2.11 109 179 5 0 cm 0.589 0.552 336 snoR20 RF00351 4 1.48 90 119 3 0 cm 0.634 0.607 337 snoR21 RF00352 6 1.98 82 104 6 0 cm 0.692 0.633 338 snoR31_Z110_Z27 RF00353 8 2.04 97 116 9 0 cm 0.590 0.505 339 snoR28 RF00355 9 2.09 78 95 3 0 cm 0.725 0.696 340 snoR32_R81 RF00356 6 1.58 98 135 4 0 cm 0.589 0.553 341 snoR44_J54 RF00357 29 2.46 97 143 5 0 cm 0.590 0.555 342 snoZ101 RF00358 13 1.71 96 121 10 0 cm 0.595 0.506 343 snoZ102_R77 RF00359 9 1.40 88 106 9 0 cm 0.646 0.556 344 snoZ107_R87 RF00360 9 2.07 117 138 6 0 cm 0.590 0.543 345 snoZ119 RF00361 6 1.02 98 116 15 1 cm 0.591 0.451 346 Pospi_RY RF00362 16 1.25 79 96 23 0 cm 0.717 0.460 347 mir-BART1 RF00363 5 1.32 70 86 24 0 cm 0.805 0.521 348 mir-BART2 RF00364 8 2.04 62 77 21 0 cm 0.903 0.657 349 mir-BHRF1-1 RF00365 5 1.84 66 83 22 0 cm 0.851 0.576 350 mir-BHRF1-2 RF00366 5 2.04 65 80 25 0 cm 0.862 0.577 351 mir-BHRF1-3 RF00367 4 1.35 65 81 22 0 cm 0.862 0.585 352 sroB RF00368 16 2.66 83 100 16 2 cm 0.684 0.544 353 sroC RF00369 6 1.27 163 181 36 1 cm 0.589 0.392 354 sroD RF00370 5 1.29 86 107 14 1 cm 0.660 0.524 355 sroE RF00371 4 1.19 92 109 19 1 cm 0.620 0.437 356 sroH RF00372 2 1.34 161 180 6 0 cm 0.589 0.558 357 RNaseP_arch RF00373 70 3.10 303 686 73 4 cm 0.590 0.358 358 Gammaretro_CES RF00374 22 0.74 101 119 32 2 cm 0.589 0.289 359 HIV_PBS RF00375 130 1.11 99 116 18 1 cm 0.591 0.424 360 HIV_GSL3 RF00376 72 2.11 84 101 8 0 cm 0.676 0.603 361 snoU6-53 RF00377 25 2.21 110 133 9 0 cm 0.590 0.521 362 Qrr RF00378 30 1.54 108 129 25 2 cm 0.590 0.392 363 ydaO-yuaA RF00379 106 4.25 136 376 26 3 cm 0.590 0.455 364 ykoK RF00380 157 3.55 169 264 47 2 cm 0.590 0.366 365 Antizyme_FSE RF00381 13 2.75 59 74 12 0 cm 0.946 0.814 366 DnaX RF00382 5 1.96 65 81 11 0 cm 0.862 0.738 367 IS1222_FSE RF00383 5 1.05 118 136 17 1 cm 0.590 0.466 368 Pox_AX_element RF00384 10 1.85 62 77 22 1 cm 0.902 0.607 369 IBV_D-RNA RF00385 10 3.56 42 56 15 0 cm 1.305 1.127 370 Entero_5_CRE RF00386 160 1.24 90 167 29 2 cm 0.632 0.331 371 IRES_FGF1 RF00387 6 0.81 168 189 51 2 cm 0.590 0.310 372 Anti-Q_RNA RF00388 6 1.65 103 138 34 2 cm 0.590 0.308 373 satBaMV_CRE RF00389 42 0.92 159 178 38 2 cm 0.591 0.375 374 UPSK RF00390 6 6.00 23 37 4 0 cm 1.522 1.464 375 RtT RF00391 57 3.04 130 164 24 1 cm 0.590 0.448 376 SNORA5 RF00392 6 1.39 134 153 26 1 cm 0.591 0.428 377 SNORA8 RF00393 5 0.95 139 157 37 1 cm 0.589 0.349 378 SNORA4 RF00394 7 1.61 141 168 40 1 cm 0.590 0.374 379 SNORA13 RF00396 50 3.45 134 162 40 1 cm 0.590 0.384 380 SNORA14 RF00397 18 1.50 135 157 37 1 cm 0.590 0.358 381 SNORA15 RF00398 22 1.56 137 157 35 1 cm 0.590 0.374 382 SNORA24 RF00399 5 1.03 131 152 33 1 cm 0.590 0.362 383 SNORA28 RF00400 26 1.67 126 148 31 1 cm 0.590 0.388 384 SNORA20 RF00401 17 1.18 128 148 39 1 cm 0.590 0.328 385 SNORA25 RF00402 30 1.72 128 152 34 1 cm 0.590 0.373 386 SNORA41 RF00403 31 2.20 133 152 27 1 cm 0.590 0.432 387 SNORA46 RF00404 22 1.38 135 157 41 1 cm 0.590 0.332 388 SNORA44 RF00405 27 1.76 131 150 21 1 cm 0.590 0.467 389 SNORA42 RF00406 21 1.57 136 154 35 1 cm 0.590 0.383 390 SNORA50 RF00407 14 2.12 136 158 22 1 cm 0.590 0.464 391 SNORA1 RF00408 29 2.11 135 155 24 1 cm 0.590 0.449 392 SNORA7 RF00409 31 1.68 140 163 37 1 cm 0.590 0.373 393 SNORA2 RF00410 18 2.03 137 157 23 1 cm 0.590 0.457 394 SNORA9 RF00411 36 1.95 133 153 28 1 cm 0.590 0.411 395 SNORA21 RF00412 5 1.08 136 154 24 1 cm 0.591 0.429 396 SNORA19 RF00413 34 1.80 131 149 26 1 cm 0.590 0.428 397 SNORA22 RF00414 31 1.83 134 154 39 2 cm 0.590 0.352 398 SNORA30 RF00415 11 1.53 129 156 37 1 cm 0.590 0.342 399 SNORA43 RF00416 21 2.02 138 160 26 1 cm 0.590 0.448 400 SNORA56 RF00417 17 1.44 129 153 33 1 cm 0.590 0.376 401 SNORA58 RF00418 20 1.55 136 157 28 1 cm 0.590 0.412 402 SNORA52 RF00419 21 2.23 134 155 31 1 cm 0.590 0.418 403 SNORA61 RF00420 25 2.41 132 154 24 1 cm 0.590 0.456 404 SNORA32 RF00421 9 1.25 121 140 23 1 cm 0.591 0.426 405 SCARNA24 RF00422 23 1.60 130 153 29 1 cm 0.590 0.400 406 SCARNA4 RF00423 24 1.25 129 149 33 1 cm 0.590 0.370 407 SCARNA16 RF00424 37 2.18 187 211 54 2 cm 0.590 0.363 408 SNORA18 RF00425 29 1.82 132 151 34 1 cm 0.590 0.381 409 SCARNA15 RF00426 22 2.30 128 155 36 1 cm 0.590 0.370 410 SCARNA23 RF00427 18 1.27 125 145 36 1 cm 0.589 0.345 411 SNORA38 RF00428 25 1.41 131 151 25 1 cm 0.590 0.430 412 SNORA29 RF00429 26 1.85 140 159 16 1 cm 0.590 0.499 413 SNORA54 RF00430 5 1.86 129 163 31 1 cm 0.590 0.384 414 SNORA55 RF00431 29 1.49 135 153 31 1 cm 0.591 0.398 415 SNORA51 RF00432 9 1.34 133 151 29 1 cm 0.591 0.414 416 Hsp90_CRE RF00433 6 0.76 152 171 49 1 cm 0.589 0.280 417 BTE RF00434 17 1.27 100 143 29 2 cm 0.590 0.327 418 ROSE RF00435 13 1.91 93 124 34 2 cm 0.614 0.302 419 UnaL2 RF00436 30 5.09 54 69 10 0 cm 1.028 0.947 420 HLE RF00437 5 1.22 130 150 27 1 cm 0.589 0.399 421 SNORA33 RF00438 28 1.91 130 155 24 1 cm 0.590 0.443 422 SNORD87 RF00439 10 1.45 85 108 7 0 cm 0.670 0.598 423 SNORD37 RF00440 6 3.05 65 83 2 0 cm 0.862 0.848 424 snoZ242 RF00441 5 1.20 198 217 19 0 cm 0.589 0.513 425 ykkC-yxkD RF00442 97 1.95 108 180 20 1 cm 0.590 0.415 426 SNORA27 RF00443 24 1.62 127 150 24 1 cm 0.590 0.442 427 PrrF RF00444 18 1.27 150 170 28 3 cm 0.589 0.424 428 mir-399 RF00445 13 3.39 118 187 27 0 cm 0.590 0.447 429 mir-133 RF00446 46 3.51 87 113 20 0 cm 0.654 0.519 430 IRES_Kv1_4 RF00447 6 1.09 260 281 51 1 cm 0.590 0.415 431 IRES_EBNA RF00448 6 1.25 217 237 35 4 cm 0.589 0.453 432 IRES_HIF1 RF00449 17 2.05 279 321 37 5 cm 0.590 0.490 433 mir-395 RF00451 25 3.13 108 279 30 0 cm 0.590 0.419 434 mir-172 RF00452 11 2.78 119 412 23 0 cm 0.590 0.468 435 Cardiovirus_CRE RF00453 4 4.00 33 47 10 0 cm 1.195 1.052 436 p27_CRE RF00454 12 1.95 59 75 14 1 cm 0.946 0.770 437 mir-15 RF00455 17 2.12 86 103 22 0 cm 0.662 0.468 438 mir-34 RF00456 18 1.74 90 107 30 0 cm 0.633 0.352 439 IRES_mnt RF00457 21 1.27 203 224 33 3 cm 0.590 0.452 440 IRES_Cripavirus RF00458 7 2.64 201 221 44 3 cm 0.590 0.391 441 MPMV_package RF00459 9 1.81 279 307 57 6 cm 0.589 0.433 442 U1A_PIE RF00460 39 3.92 74 92 14 0 cm 0.763 0.660 443 IRES_VEGF_A RF00461 7 0.72 308 330 95 2 cm 0.590 0.310 444 IRES_APC RF00462 6 3.11 53 68 11 0 cm 1.047 0.917 445 ApoB_5_CRE RF00463 5 0.81 127 146 41 3 cm 0.591 0.301 446 mir-92 RF00464 23 2.18 80 96 26 0 cm 0.708 0.489 447 JEV_hairpin RF00465 20 2.64 59 75 18 0 cm 0.946 0.762 448 RSV_PBS RF00467 22 1.47 75 91 15 0 cm 0.753 0.581 449 HCV_SLVII RF00468 110 4.04 65 81 17 0 cm 0.863 0.733 450 HCV_SLIV RF00469 110 12.44 37 49 15 0 cm 1.472 1.380 451 Toga_5_CRE RF00470 33 1.77 277 302 42 3 cm 0.590 0.468 452 snosnR48 RF00471 6 1.74 113 135 4 0 cm 0.589 0.556 453 snosnR55 RF00472 6 2.86 92 181 0 0 hmm - 0.621 454 snosnR54 RF00473 8 2.90 87 309 0 0 hmm - 0.655 455 snosnR57 RF00474 5 1.68 95 116 4 0 cm 0.602 0.564 456 snosnR69 RF00475 6 2.79 101 166 4 0 cm 0.590 0.562 457 snosnR61 RF00476 56 6.25 85 164 0 0 hmm - 0.669 458 snosnR66 RF00477 4 1.37 104 137 6 0 cm 0.591 0.535 459 SCARNA6 RF00478 17 2.12 265 302 57 1 cm 0.590 0.427 460 snosnR71 RF00479 7 1.99 97 115 4 0 cm 0.591 0.558 461 HIV_FE RF00480 145 5.48 52 66 10 0 cm 1.066 0.972 462 HCV_X3 RF00481 22 0.64 100 118 36 2 cm 0.591 0.251 463 snoF1_F2 RF00482 8 1.04 140 158 32 1 cm 0.590 0.380 464 IRES_IGF2 RF00483 9 0.92 121 140 28 3 cm 0.591 0.388 465 IRES_Cx32 RF00484 6 0.89 149 169 32 1 cm 0.589 0.394 466 K_chan_RES RF00485 85 2.64 114 131 24 0 cm 0.590 0.461 467 mir-129 RF00486 6 1.17 92 108 25 0 cm 0.620 0.375 468 IRES_Cx43 RF00487 14 1.10 204 224 56 3 cm 0.590 0.350 469 U1_yeast RF00488 5 2.35 569 667 78 5 cm 0.589 0.474 470 ctRNA_p42d RF00489 10 4.41 46 61 12 0 cm 1.198 1.087 471 S-element RF00490 29 4.66 67 85 22 0 cm 0.838 0.661 472 SCARNA17 RF00492 6 1.32 144 162 32 0 cm 0.590 0.414 473 snoU2-30 RF00493 21 2.26 70 87 11 0 cm 0.804 0.693 474 snoU2_19 RF00494 29 3.00 80 98 9 0 cm 0.709 0.626 475 IRES_Hsp70 RF00495 14 1.45 216 245 54 2 cm 0.590 0.390 476 Corona_SL-III RF00496 5 3.75 42 56 8 0 cm 1.305 1.214 477 EAV_LTH RF00498 6 2.74 45 60 11 0 cm 1.222 1.077 478 Parecho_CRE RF00499 5 0.83 116 132 38 1 cm 0.589 0.286 479 TCV_H5 RF00500 5 2.63 45 60 12 0 cm 1.223 1.061 480 Rota_CRE RF00501 14 1.93 68 85 17 0 cm 0.826 0.637 481 TCV_Pr RF00502 4 4.00 34 48 8 0 cm 1.343 1.240 482 RNAIII RF00503 11 1.13 519 573 143 13 cm 0.590 0.335 483 Glycine RF00504 44 4.01 94 263 22 1 cm 0.608 0.435 484 RydC RF00505 5 2.14 64 81 7 0 cm 0.876 0.800 485 Thr_leader RF00506 25 2.09 118 153 35 1 cm 0.590 0.367 486 Corona_FSE RF00507 23 3.83 82 109 11 0 cm 0.692 0.593 487 snosnR64 RF00509 10 2.12 106 202 0 0 hmm - 0.543 488 Tombus_IRE RF00510 23 1.15 94 111 27 0 cm 0.608 0.358 489 IRES_KSHV RF00511 5 0.78 248 269 61 3 cm 0.591 0.358 490 Leu_leader RF00512 6 1.87 148 174 43 1 cm 0.590 0.360 491 Trp_leader RF00513 22 4.48 100 173 21 1 cm 0.590 0.458 492 His_leader RF00514 33 3.13 127 183 36 2 cm 0.590 0.368 493 PyrR RF00515 41 8.95 126 364 41 2 cm 0.590 0.374 494 ylbH RF00516 3 1.26 122 186 33 2 cm 0.590 0.325 495 serC RF00517 70 7.75 52 67 12 1 cm 1.066 0.923 496 speF RF00518 6 2.55 153 176 22 3 cm 0.590 0.489 497 suhB RF00519 87 10.98 77 104 13 1 cm 0.734 0.592 498 ybhL RF00520 6 1.80 77 139 18 0 cm 0.735 0.553 499 SAM_alpha RF00521 40 3.25 79 95 6 0 cm 0.717 0.666 500 PreQ1 RF00522 35 35.00 45 288 5 0 cm 1.160 1.097 501 Prion_pknot RF00523 148 14.11 40 74 6 0 cm 1.367 1.326 502 R2_retro_el RF00524 15 2.75 212 295 41 2 cm 0.590 0.430 503 Flavivirus_DB RF00525 111 3.02 72 103 19 1 cm 0.783 0.578 504 snoMe28S-U3344 RF00526 8 1.92 83 107 3 0 cm 0.684 0.645 505 snoMe28S-G3255 RF00527 10 2.26 84 113 7 0 cm 0.676 0.619 506 snoMe28S-Gm1083 RF00528 11 1.70 89 117 4 0 cm 0.640 0.601 507 snoMe28S-Am2589 RF00529 16 2.45 109 128 3 0 cm 0.590 0.560 508 snoMe28S-Cm2645 RF00530 20 2.58 75 99 3 0 cm 0.752 0.723 509 snoMe28S-Gm3113 RF00531 15 2.34 85 104 4 0 cm 0.669 0.630 510 snoMe18S-Um1356 RF00532 21 2.71 86 113 3 0 cm 0.661 0.624 511 snoMe18S-Gm1358 RF00533 12 2.26 79 108 3 0 cm 0.717 0.684 512 SgrS RF00534 8 5.70 232 384 59 3 cm 0.590 0.396 513 snoMe28S-Am982 RF00535 13 2.78 80 100 3 0 cm 0.708 0.685 514 snoMe28S-Cm3227 RF00536 13 1.51 82 105 4 0 cm 0.692 0.645 515 snoMe28S-Am2634 RF00537 18 2.20 97 118 3 0 cm 0.590 0.562 516 snoCD11 RF00538 26 2.61 75 93 6 0 cm 0.753 0.699 517 snoMe28S-Cm788 RF00539 5 1.72 74 91 3 0 cm 0.762 0.725 518 snopsi18S-1854 RF00540 16 1.47 156 189 31 1 cm 0.589 0.419 519 snopsi28S-2876 RF00541 8 1.35 143 180 28 1 cm 0.589 0.433 520 snopsi28S-1192 RF00542 15 1.36 138 183 30 1 cm 0.590 0.404 521 snopsi18S-1377 RF00543 15 1.87 140 165 24 1 cm 0.591 0.450 522 snopsi28S-3327 RF00544 14 1.26 143 166 35 1 cm 0.589 0.379 523 snopsi18S-841 RF00545 24 1.86 145 169 43 1 cm 0.590 0.346 524 snopsi28S-3316 RF00546 33 1.88 133 155 37 1 cm 0.590 0.372 525 IRES_TrkB RF00547 16 1.69 352 378 117 5 cm 0.590 0.335 526 U11 RF00548 72 3.07 137 717 42 3 cm 0.590 0.323 527 IRES_c-sis RF00549 10 0.70 621 649 201 9 cm 0.589 0.287 528 HepE_CRE RF00550 46 1.37 150 169 41 1 cm 0.590 0.375 529 bicoid_3 RF00551 15 1.68 547 602 156 2 cm 0.590 0.342 530 rncO RF00552 18 1.52 214 236 47 2 cm 0.589 0.399 531 SCARNA1 RF00553 29 2.76 166 195 46 2 cm 0.590 0.377 532 SNORA48 RF00554 24 2.10 135 174 38 1 cm 0.590 0.381 533 L13_leader RF00555 26 5.43 60 261 16 0 cm 0.930 0.693 534 L19_leader RF00556 10 10.00 42 58 13 0 cm 1.071 0.925 535 L10_leader RF00557 97 19.62 139 411 19 1 cm 0.590 0.481 536 L20_leader RF00558 43 5.60 127 178 24 2 cm 0.590 0.465 537 L21_leader RF00559 38 8.41 78 273 18 0 cm 0.726 0.562 538 SNORA17 RF00560 53 1.57 132 156 44 1 cm 0.590 0.323 539 SNORA40 RF00561 28 1.32 128 147 39 1 cm 0.590 0.330 540 SNORA49 RF00562 21 1.30 133 153 34 1 cm 0.590 0.372 541 SNORA53 RF00563 28 1.73 248 269 75 2 cm 0.590 0.328 542 SCARNA11 RF00564 24 1.59 140 162 41 1 cm 0.590 0.351 543 SCARNA3 RF00565 23 1.81 141 159 34 1 cm 0.590 0.403 544 SNORA35 RF00566 29 3.15 129 152 31 1 cm 0.590 0.404 545 SNORD17 RF00567 19 1.28 238 263 85 2 cm 0.590 0.285 546 SNORA26 RF00568 76 2.23 122 158 33 1 cm 0.590 0.377 547 SNORD19 RF00569 22 2.32 76 95 4 0 cm 0.744 0.702 548 SNORD64 RF00570 17 3.32 67 85 15 0 cm 0.838 0.687 549 SNORD65 RF00571 26 3.86 73 153 0 0 hmm - 0.772 550 SNORD66 RF00572 20 2.28 76 94 4 0 cm 0.744 0.701 551 SNORD67 RF00573 15 1.43 111 131 20 0 cm 0.590 0.434 552 SNORD69 RF00574 11 1.72 77 97 10 0 cm 0.734 0.626 553 SNORD70 RF00575 21 2.53 89 109 12 0 cm 0.640 0.529 554 SNORD71 RF00576 18 1.42 86 103 22 1 cm 0.661 0.446 555 SNORD72 RF00577 16 1.95 80 98 7 0 cm 0.709 0.633 556 SNORD89 RF00578 18 0.91 114 134 33 2 cm 0.590 0.333 557 SNORD90 RF00579 18 1.16 111 129 30 0 cm 0.591 0.356 558 SNORD91 RF00580 24 2.04 95 112 7 0 cm 0.602 0.541 559 SNORD12 RF00581 8 2.20 90 109 9 0 cm 0.633 0.551 560 SCARNA14 RF00582 22 1.67 136 161 38 1 cm 0.590 0.364 561 SNORD105 RF00584 15 1.79 87 105 8 0 cm 0.654 0.583 562 SNORA12 RF00586 23 1.96 148 185 30 2 cm 0.590 0.436 563 SNORD41 RF00588 20 3.23 70 91 4 0 cm 0.804 0.765 564 SNORD77 RF00591 21 2.62 68 87 18 1 cm 0.827 0.632 565 SNORD78 RF00592 19 4.45 65 142 0 0 hmm - 0.863 566 snoU83B RF00593 21 1.83 94 113 5 0 cm 0.608 0.559 567 SNORD86 RF00594 6 2.07 86 103 30 0 cm 0.662 0.423 568 SNORA76 RF00598 22 1.07 132 152 39 1 cm 0.590 0.332 569 SNORA77 RF00599 19 1.62 125 145 34 1 cm 0.590 0.373 570 SNORA79 RF00600 25 1.52 143 164 38 1 cm 0.590 0.362 571 SCARNA20 RF00601 5 1.13 130 150 33 1 cm 0.590 0.377 572 SCARNA21 RF00602 24 1.92 140 186 31 1 cm 0.590 0.413 573 SNORD23 RF00603 15 1.56 110 130 5 0 cm 0.590 0.552 574 SNORD88 RF00604 35 2.99 91 116 7 0 cm 0.626 0.563 575 SNORD93 RF00606 17 2.04 74 132 4 0 cm 0.762 0.727 576 SNORD98 RF00607 10 2.80 65 83 4 0 cm 0.862 0.809 577 SNORD99 RF00608 23 2.68 74 91 5 0 cm 0.763 0.714 578 SNORD100 RF00609 26 2.43 82 104 6 0 cm 0.691 0.625 579 SNORD110 RF00610 16 2.17 71 92 4 0 cm 0.794 0.751 580 SNORD111 RF00611 5 1.95 89 118 5 0 cm 0.640 0.595 581 SNORD75 RF00612 5 3.51 62 148 4 0 cm 0.902 0.855 582 SNORD94 RF00613 21 1.90 137 161 5 0 cm 0.590 0.559 583 SNORA11 RF00614 35 1.48 129 150 36 1 cm 0.590 0.366 584 LhrA RF00615 10 0.75 269 290 82 3 cm 0.589 0.293 585 LhrC RF00616 12 1.09 111 132 19 1 cm 0.590 0.427 586 cHP RF00617 59 15.88 45 73 8 0 cm 1.223 1.102 587 U4atac RF00618 61 4.49 133 239 30 2 cm 0.590 0.408 588 U6atac RF00619 62 4.02 126 157 14 1 cm 0.590 0.493 589 HCV_ARF_SL RF00620 36 0.92 153 171 46 1 cm 0.589 0.328 590 CoTC_ribozyme RF00621 10 1.08 191 212 49 2 cm 0.589 0.357 591 CPEB3_ribozyme RF00622 12 1.79 78 94 15 1 cm 0.725 0.574 592 P1 RF00623 14 2.33 180 205 28 1 cm 0.590 0.474 593 P9 RF00624 17 2.30 74 133 16 1 cm 0.763 0.612 594 P11 RF00625 15 1.75 139 158 33 3 cm 0.590 0.389 595 Gurken RF00626 3 1.32 69 85 24 0 cm 0.815 0.501 596 P15 RF00627 22 1.15 119 142 35 3 cm 0.590 0.332 597 P16 RF00628 27 1.98 194 217 31 2 cm 0.589 0.464 598 P24 RF00629 14 1.29 255 277 63 7 cm 0.589 0.380 599 P26 RF00630 27 4.65 66 82 17 1 cm 0.850 0.682 600 sxy RF00632 2 0.78 104 121 33 1 cm 0.590 0.288 601 SAM-IV RF00634 40 1.66 116 149 31 2 cm 0.590 0.348 602 HAR1A RF00635 13 1.67 118 221 0 0 hmm - 0.489 603 NRON RF00636 24 1.21 370 392 64 4 cm 0.589 0.439 604 mir-276 RF00637 16 1.50 94 121 27 0 cm 0.608 0.367 605 MIR159 RF00638 66 11.82 196 631 26 0 cm 0.590 0.541 606 mir-515 RF00639 40 2.20 87 106 19 0 cm 0.655 0.482 607 MIR167_1 RF00640 42 5.23 130 1373 23 0 cm 0.590 0.507 608 mir-154 RF00641 121 21.33 81 100 27 0 cm 0.700 0.554 609 mir-23 RF00642 22 3.46 75 106 14 0 cm 0.753 0.654 610 MIR171_1 RF00643 57 3.87 101 314 18 0 cm 0.590 0.495 611 mir-27 RF00644 32 3.20 83 99 18 0 cm 0.684 0.568 612 MIR169_2 RF00645 100 15.29 134 992 22 0 cm 0.590 0.534 613 mir-204 RF00646 32 1.71 102 120 28 0 cm 0.590 0.379 614 MIR164 RF00647 39 3.66 109 477 22 0 cm 0.590 0.483 615 MIR396 RF00648 26 3.62 118 454 23 0 cm 0.590 0.462 616 mir-128 RF00649 18 1.99 84 101 23 0 cm 0.676 0.478 617 mir-153 RF00650 18 1.74 86 117 30 0 cm 0.661 0.372 618 mir-221 RF00651 47 3.24 70 88 21 0 cm 0.804 0.629 619 MIR478 RF00652 17 2.86 91 181 0 0 hmm - 0.627 620 mir-22 RF00653 12 1.44 88 105 33 0 cm 0.647 0.327 621 mir-216 RF00654 33 3.92 89 106 18 0 cm 0.640 0.523 622 mir-28 RF00655 29 1.99 86 120 26 0 cm 0.662 0.423 623 mir-205 RF00656 29 2.23 102 119 24 0 cm 0.590 0.422 624 mir-184 RF00657 32 2.92 84 126 21 0 cm 0.677 0.514 625 mir-21 RF00658 11 1.89 72 89 27 0 cm 0.783 0.495 626 mir-365 RF00659 9 1.32 93 110 29 0 cm 0.613 0.347 627 mir-214 RF00660 8 1.13 110 126 36 1 cm 0.591 0.306 628 mir-31 RF00661 28 4.16 86 317 14 0 cm 0.661 0.580 629 mir-132 RF00662 22 3.03 88 125 16 0 cm 0.647 0.539 630 mir-183 RF00663 16 1.82 102 119 23 0 cm 0.590 0.404 631 mir-223 RF00664 19 1.59 110 128 31 0 cm 0.590 0.351 632 mir-290 RF00665 27 3.44 82 103 25 0 cm 0.692 0.502 633 mir-32 RF00666 8 1.50 70 85 30 0 cm 0.803 0.453 634 mir-33 RF00667 50 4.70 69 93 21 0 cm 0.815 0.659 635 mir-302 RF00668 44 5.21 69 85 18 0 cm 0.815 0.665 636 mir-96 RF00669 25 1.51 78 95 26 0 cm 0.725 0.445 637 mir-105 RF00670 20 3.97 81 96 29 0 cm 0.700 0.485 638 mir-138 RF00671 24 1.86 83 99 24 0 cm 0.684 0.471 639 mir-190 RF00672 29 2.25 89 112 31 0 cm 0.640 0.373 640 mir-217 RF00673 27 1.61 106 123 30 0 cm 0.590 0.365 641 mir-187 RF00674 20 1.86 104 126 23 0 cm 0.591 0.427 642 mir-145 RF00675 13 1.30 88 107 31 0 cm 0.647 0.355 643 mir-127 RF00676 5 0.67 97 114 31 0 cm 0.591 0.284 644 MIR168 RF00677 10 2.48 133 273 23 0 cm 0.590 0.474 645 mir-140 RF00678 14 0.99 98 115 30 0 cm 0.591 0.316 646 mir-210 RF00679 26 2.79 96 114 27 0 cm 0.596 0.401 647 mir-224 RF00680 5 1.20 81 98 32 0 cm 0.700 0.359 648 mir-198 RF00681 3 1.83 62 78 22 1 cm 0.902 0.641 649 mir-144 RF00682 22 1.50 85 102 27 0 cm 0.668 0.398 650 mir-143 RF00683 18 1.43 106 123 28 0 cm 0.590 0.370 651 mir-122 RF00684 26 1.44 74 90 24 0 cm 0.762 0.482 652 mir-36 RF00685 46 6.50 103 137 28 0 cm 0.590 0.425 653 mir-338 RF00686 21 2.16 82 99 21 0 cm 0.692 0.503 654 mir-136 RF00687 2 0.90 83 99 32 0 cm 0.684 0.330 655 MIR394 RF00688 19 2.23 111 196 18 0 cm 0.591 0.474 656 MIR390 RF00689 16 2.16 123 191 20 0 cm 0.590 0.477 657 MIR408 RF00690 8 2.07 136 431 24 0 cm 0.590 0.465 658 mir-146 RF00691 33 3.76 90 117 17 0 cm 0.633 0.522 659 MIR171_2 RF00692 7 1.84 112 151 26 0 cm 0.590 0.406 660 mir-147 RF00693 64 10.64 70 106 15 0 cm 0.804 0.714 661 mir-137 RF00694 28 2.24 100 119 34 0 cm 0.590 0.340 662 MIR398 RF00695 14 3.44 109 248 20 0 cm 0.590 0.476 663 mir-203 RF00696 10 1.71 80 97 25 0 cm 0.709 0.459 664 mir-186 RF00697 19 1.93 93 110 34 0 cm 0.614 0.338 665 mir-489 RF00698 19 1.43 92 109 32 0 cm 0.620 0.341 666 mir-134 RF00699 6 1.50 73 89 24 0 cm 0.772 0.508 667 mir-375 RF00700 9 2.42 69 88 17 0 cm 0.815 0.658 668 mir-126 RF00701 12 1.73 73 89 21 0 cm 0.772 0.545 669 mir-182 RF00702 17 1.47 85 102 20 0 cm 0.668 0.470 670 mir-139 RF00703 5 1.88 68 89 24 0 cm 0.826 0.553 671 MIR397 RF00704 7 2.83 117 149 25 0 cm 0.590 0.448 672 mir-202 RF00705 13 1.48 87 103 30 0 cm 0.654 0.365 673 mir-263 RF00706 23 2.96 92 110 27 0 cm 0.620 0.416 674 mir-197 RF00707 5 1.25 75 104 31 0 cm 0.753 0.416 675 mir-450 RF00708 21 2.05 91 113 29 0 cm 0.627 0.374 676 mir-455 RF00709 5 0.92 86 103 29 0 cm 0.663 0.351 677 mir-44 RF00710 6 1.38 94 111 27 0 cm 0.607 0.361 678 mir-449 RF00711 56 5.44 90 174 28 0 cm 0.633 0.445 679 mir-460 RF00712 8 1.87 77 93 21 0 cm 0.734 0.529 680 mir-239 RF00713 9 2.96 102 123 24 0 cm 0.590 0.429 681 MIR535 RF00714 4 1.66 102 124 27 0 cm 0.590 0.378 682 mir-383 RF00715 6 1.29 73 89 25 0 cm 0.773 0.485 683 mir-3 RF00716 11 2.79 73 100 26 0 cm 0.772 0.534 684 mir-315 RF00717 16 1.82 84 100 28 0 cm 0.676 0.401 685 mir-431 RF00718 9 0.87 114 132 35 0 cm 0.590 0.320 686 mir-326 RF00719 7 0.63 95 112 35 0 cm 0.602 0.262 687 mir-317 RF00720 12 1.76 92 108 32 0 cm 0.620 0.345 688 MIR475 RF00721 4 0.92 124 142 41 0 cm 0.590 0.281 689 mir-451 RF00722 19 2.28 72 87 27 0 cm 0.782 0.498 690 mir-448 RF00723 19 1.57 112 130 30 0 cm 0.589 0.372 691 mir-282 RF00724 15 2.44 95 131 24 0 cm 0.602 0.421 692 mir-iab-4 RF00725 8 1.30 84 105 27 0 cm 0.676 0.396 693 mir-87 RF00726 8 1.00 99 117 30 0 cm 0.590 0.311 694 bantam RF00727 11 2.04 89 128 25 0 cm 0.640 0.431 695 mir-81 RF00728 9 1.82 102 119 34 0 cm 0.590 0.325 696 mir-278 RF00729 9 1.31 100 123 27 0 cm 0.590 0.369 697 mir-277 RF00730 12 1.64 101 157 30 0 cm 0.590 0.352 698 mir-155 RF00731 17 3.32 65 96 23 0 cm 0.862 0.652 699 mir-305 RF00732 14 1.59 88 105 31 0 cm 0.647 0.364 700 mir-296 RF00733 12 1.33 80 96 33 0 cm 0.708 0.364 701 mir-52 RF00734 5 0.89 99 117 34 0 cm 0.591 0.266 702 mir-367 RF00735 13 1.96 68 84 25 0 cm 0.827 0.558 703 mir-320 RF00736 55 4.84 82 103 19 0 cm 0.692 0.566 704 mir-322 RF00737 11 1.01 84 101 31 0 cm 0.676 0.348 705 MIR476 RF00739 2 0.78 93 109 36 0 cm 0.613 0.236 706 mir-370 RF00740 6 1.08 79 96 29 0 cm 0.716 0.399 707 mir-378 RF00741 8 1.28 66 82 24 0 cm 0.851 0.536 708 MIR162_2 RF00742 10 1.49 92 214 25 0 cm 0.620 0.390 709 mir-308 RF00743 11 2.28 63 85 24 0 cm 0.888 0.629 710 mir-361 RF00744 5 1.28 71 87 24 0 cm 0.792 0.500 711 mir-499 RF00745 19 1.58 89 106 25 0 cm 0.640 0.411 712 mir-454 RF00746 17 2.24 115 135 34 0 cm 0.590 0.368 713 mir-283 RF00747 11 2.03 99 116 25 0 cm 0.590 0.394 714 mir-433 RF00748 5 0.92 93 110 22 0 cm 0.612 0.399 715 mir-208 RF00749 17 2.28 80 98 26 0 cm 0.709 0.469 716 mir-458 RF00750 7 1.61 78 94 26 0 cm 0.726 0.449 717 mir-12 RF00751 7 2.01 74 90 27 0 cm 0.763 0.476 718 mir-14 RF00752 6 2.24 67 85 22 0 cm 0.838 0.627 719 mir-503 RF00753 14 1.55 71 87 28 0 cm 0.794 0.480 720 mir-279 RF00754 12 2.14 93 112 34 0 cm 0.614 0.325 721 mir-542 RF00755 5 1.04 85 102 29 0 cm 0.667 0.365 722 mir-299 RF00756 6 1.91 63 77 28 0 cm 0.888 0.545 723 mir-275 RF00757 15 1.81 91 116 29 0 cm 0.627 0.365 724 mir-346 RF00758 5 0.85 98 115 27 0 cm 0.591 0.348 725 mir-342 RF00760 10 0.84 99 116 30 0 cm 0.591 0.309 726 mir-340 RF00761 31 3.68 97 116 36 0 cm 0.590 0.335 727 mir-412 RF00762 9 0.83 91 107 34 0 cm 0.626 0.285 728 mir-339 RF00763 14 1.27 96 113 33 0 cm 0.596 0.319 729 mir-191 RF00764 5 0.82 91 108 34 0 cm 0.628 0.279 730 mir-337 RF00765 6 0.93 96 114 29 0 cm 0.596 0.322 731 mir-335 RF00766 9 0.88 94 113 32 0 cm 0.607 0.288 732 mir-150 RF00767 17 1.54 85 103 33 0 cm 0.668 0.347 733 MIR405 RF00768 13 1.64 122 144 30 0 cm 0.590 0.373 734 mir-331 RF00769 5 0.82 94 111 26 0 cm 0.606 0.347 735 mir-330 RF00770 6 0.78 97 115 32 0 cm 0.591 0.282 736 mir-185 RF00771 5 0.84 81 97 34 0 cm 0.700 0.329 737 mir-328 RF00772 13 1.48 84 100 28 0 cm 0.677 0.405 738 mir-298 RF00773 5 1.54 88 104 33 0 cm 0.647 0.347 739 mir-360 RF00774 5 1.61 113 134 30 0 cm 0.590 0.366 740 mir-432 RF00775 6 1.68 94 111 28 0 cm 0.608 0.395 741 mir-540 RF00776 2 1.00 84 100 28 0 cm 0.676 0.385 742 mir-541 RF00777 10 1.29 90 109 30 0 cm 0.634 0.355 743 MIR473 RF00778 6 3.13 95 151 20 0 cm 0.602 0.475 744 MIR474 RF00779 11 3.38 107 178 41 1 cm 0.590 0.298 745 MIR477 RF00780 3 1.32 99 137 29 0 cm 0.590 0.344 746 mir-505 RF00781 5 0.89 84 101 32 0 cm 0.677 0.334 747 MIR480 RF00782 69 3.37 140 171 19 0 cm 0.590 0.498 748 mir-484 RF00783 15 2.74 67 83 23 0 cm 0.838 0.624 749 mir-486 RF00784 12 1.63 68 83 24 0 cm 0.827 0.540 750 mir-90 RF00785 5 0.99 97 116 36 0 cm 0.590 0.249 751 mir-289 RF00786 3 0.97 100 117 33 0 cm 0.590 0.287 752 mir-288 RF00787 7 0.84 97 115 34 0 cm 0.590 0.285 753 mir-287 RF00788 9 1.36 93 110 29 0 cm 0.615 0.352 754 mir-286 RF00789 14 1.73 100 137 31 0 cm 0.590 0.332 755 mir-358 RF00790 3 1.29 111 131 30 0 cm 0.590 0.353 756 mir-357 RF00791 5 1.38 112 129 39 0 cm 0.590 0.288 757 mir-490 RF00792 19 2.37 128 150 28 0 cm 0.591 0.410 758 mir-497 RF00793 8 0.92 112 130 34 0 cm 0.589 0.316 759 mir-42 RF00794 5 0.90 98 122 34 0 cm 0.589 0.267 760 mir-43 RF00795 4 1.08 105 123 36 0 cm 0.591 0.286 761 mir-48 RF00796 4 1.53 113 131 30 0 cm 0.590 0.378 762 mir-355 RF00797 4 1.21 119 136 32 0 cm 0.589 0.339 763 mir-49 RF00798 4 0.94 97 115 34 0 cm 0.591 0.275 764 mir-354 RF00799 4 0.84 111 136 34 0 cm 0.589 0.315 765 mir-353 RF00800 4 1.11 115 132 32 0 cm 0.591 0.347 766 mir-280 RF00801 8 1.07 95 114 35 0 cm 0.601 0.269 767 mir-207 RF00802 6 1.30 79 103 31 0 cm 0.716 0.410 768 mir-425 RF00803 5 1.47 85 102 20 0 cm 0.670 0.479 769 mir-240 RF00804 3 1.31 113 139 30 0 cm 0.590 0.362 770 mir-351 RF00805 2 0.71 99 117 30 0 cm 0.590 0.302 771 mir-350 RF00806 11 0.93 99 117 29 0 cm 0.590 0.312 772 mir-314 RF00807 6 1.00 90 114 32 0 cm 0.634 0.298 773 mir-86 RF00808 5 0.91 98 114 37 0 cm 0.591 0.251 774 mir-241 RF00809 4 1.14 96 116 29 0 cm 0.596 0.329 775 mir-85 RF00810 5 1.54 106 126 31 0 cm 0.590 0.346 776 mir-84 RF00811 4 1.54 113 131 26 0 cm 0.590 0.400 777 mir-83 RF00812 4 0.89 109 128 33 0 cm 0.591 0.308 778 mir-11 RF00813 15 2.57 75 140 25 0 cm 0.753 0.521 779 mir-316 RF00814 4 0.84 89 106 35 0 cm 0.641 0.271 780 mir-244 RF00815 4 0.97 103 128 38 0 cm 0.591 0.260 781 mir-245 RF00816 3 1.06 97 115 18 0 cm 0.589 0.431 782 mir-80 RF00817 4 0.79 101 119 34 0 cm 0.590 0.266 783 mir-318 RF00818 5 1.75 68 85 26 0 cm 0.827 0.541 784 mir-246 RF00819 4 1.51 110 128 33 0 cm 0.590 0.335 785 mir-248 RF00820 4 1.31 105 122 31 0 cm 0.590 0.335 786 mir-249 RF00821 4 1.19 112 129 38 0 cm 0.590 0.285 787 mir-274 RF00822 7 0.85 100 134 37 0 cm 0.590 0.247 788 lsy-6 RF00823 4 1.62 74 92 28 0 cm 0.763 0.433 789 mir-50 RF00824 5 1.06 101 118 37 0 cm 0.590 0.260 790 mir-344 RF00825 35 3.23 95 114 32 0 cm 0.602 0.367 791 mir-55 RF00826 5 1.20 97 116 31 0 cm 0.589 0.309 792 mir-77 RF00827 5 0.98 97 133 36 0 cm 0.590 0.257 793 mir-75 RF00828 4 1.18 100 117 32 0 cm 0.591 0.305 794 mir-149 RF00829 3 0.68 89 107 34 0 cm 0.640 0.282 795 mir-74 RF00830 4 1.55 96 121 25 0 cm 0.595 0.377 796 mir-73 RF00831 7 1.54 100 123 30 0 cm 0.590 0.335 797 mir-71 RF00832 12 4.23 59 115 17 0 cm 0.945 0.812 798 mir-70 RF00833 4 2.32 120 136 31 0 cm 0.590 0.399 799 mir-268 RF00834 4 1.11 95 113 28 0 cm 0.601 0.337 800 mir-58 RF00835 4 0.96 97 128 25 0 cm 0.590 0.343 801 mir-250 RF00836 4 1.29 81 98 27 0 cm 0.700 0.413 802 mir-251 RF00837 4 0.90 98 115 34 0 cm 0.591 0.261 803 mir-252 RF00838 10 3.37 111 186 29 0 cm 0.590 0.399 804 mir-452 RF00839 4 0.96 85 101 33 0 cm 0.669 0.314 805 mir-374 RF00840 13 1.91 71 86 29 0 cm 0.793 0.482 806 mir-384 RF00841 16 2.76 88 168 26 0 cm 0.647 0.431 807 MIR403 RF00842 13 2.55 115 232 29 0 cm 0.590 0.404 808 mir-228 RF00843 4 0.68 97 116 35 0 cm 0.591 0.248 809 mir-67 RF00844 14 2.98 68 141 19 0 cm 0.826 0.638 810 MIR158 RF00845 2 0.76 100 117 33 0 cm 0.589 0.275 811 mir-64 RF00846 4 2.12 110 126 25 0 cm 0.590 0.413 812 mir-62 RF00847 4 1.83 60 75 22 0 cm 0.930 0.651 813 mir-61 RF00848 4 1.18 87 106 32 0 cm 0.653 0.334 814 mir-60 RF00849 4 1.38 72 88 27 0 cm 0.782 0.461 815 mir-259 RF00850 4 1.25 103 120 30 0 cm 0.590 0.345 816 mir-230 RF00851 2 0.82 98 114 37 0 cm 0.590 0.238 817 mir-231 RF00852 4 1.33 83 99 26 0 cm 0.684 0.406 818 mir-304 RF00853 5 0.88 88 106 33 0 cm 0.648 0.300 819 mir-5 RF00854 6 1.49 72 88 26 0 cm 0.782 0.479 820 mir-254 RF00855 4 1.10 110 134 34 0 cm 0.590 0.315 821 mir-232 RF00856 3 1.05 98 116 29 0 cm 0.590 0.323 822 mir-233 RF00857 4 1.04 99 117 31 0 cm 0.589 0.304 823 mir-306 RF00858 7 1.69 83 133 33 0 cm 0.684 0.374 824 mir-234 RF00859 4 1.44 102 119 29 0 cm 0.590 0.343 825 mir-488 RF00861 5 1.02 83 101 30 0 cm 0.685 0.348 826 mir-491 RF00862 5 1.05 84 100 33 0 cm 0.677 0.342 827 mir-BART17 RF00863 2 0.93 104 121 30 0 cm 0.589 0.328 828 mir-BART20 RF00864 2 1.10 81 98 28 0 cm 0.699 0.392 829 MIR169_5 RF00865 6 1.88 129 193 26 0 cm 0.590 0.436 830 mir-BART3 RF00866 2 1.16 76 91 29 0 cm 0.744 0.421 831 mir-BART5 RF00867 2 0.93 89 106 29 0 cm 0.641 0.350 832 mir-BART15 RF00868 2 1.21 79 96 27 0 cm 0.717 0.413 833 mir-BART7 RF00869 2 0.86 86 103 33 0 cm 0.661 0.305 834 mir-423 RF00870 4 1.08 81 99 31 0 cm 0.701 0.360 835 mir-689 RF00871 13 1.20 109 137 25 0 cm 0.590 0.399 836 mir-652 RF00872 13 1.47 97 116 31 0 cm 0.590 0.320 837 mir-550 RF00873 3 0.67 97 114 31 0 cm 0.590 0.283 838 mir-BART12 RF00874 2 0.88 96 113 31 0 cm 0.595 0.297 839 mir-692 RF00875 11 1.87 83 105 22 0 cm 0.684 0.486 840 mir-684 RF00876 28 1.32 88 109 27 0 cm 0.647 0.385 841 mir-592 RF00877 5 0.90 88 105 34 0 cm 0.648 0.299 842 mir-456 RF00878 5 1.65 104 157 32 0 cm 0.590 0.353 843 mir-615 RF00879 6 0.71 96 115 28 0 cm 0.595 0.331 844 MIR811 RF00882 5 0.68 190 207 81 0 cm 0.590 0.172 845 MIR820 RF00883 2 0.40 181 200 76 0 cm 0.589 0.167 846 MIR815 RF00884 3 1.36 81 102 32 0 cm 0.700 0.383 847 MIR821 RF00885 5 0.74 275 294 113 0 cm 0.590 0.184 848 MIR807 RF00886 30 1.15 176 197 64 0 cm 0.590 0.258 849 mir-802 RF00887 13 1.01 94 111 33 0 cm 0.608 0.282 850 mir-770 RF00888 4 0.78 99 116 40 0 cm 0.590 0.225 851 mir-668 RF00890 6 1.71 61 95 26 0 cm 0.916 0.592 852 mir-671 RF00891 3 0.96 75 92 29 0 cm 0.752 0.425 853 mir-551 RF00892 20 1.94 86 102 30 0 cm 0.662 0.396 854 MIR854 RF00893 3 1.03 221 242 18 0 cm 0.591 0.521 855 mir-790 RF00894 2 1.42 71 87 23 0 cm 0.794 0.532 856 mir-786 RF00895 2 1.01 91 108 32 0 cm 0.627 0.297 857 mir-787 RF00896 2 1.20 92 109 31 0 cm 0.620 0.314 858 mir-675 RF00897 11 1.54 73 89 26 0 cm 0.773 0.489 859 mir-242 RF00898 2 1.45 71 88 23 0 cm 0.794 0.516 860 mir-235 RF00899 2 1.50 76 93 19 0 cm 0.743 0.533 861 mir-255 RF00900 2 1.11 105 140 25 0 cm 0.590 0.370 862 MIR845_1 RF00901 2 0.95 91 107 31 0 cm 0.627 0.310 863 mir-791 RF00902 3 1.53 86 103 25 0 cm 0.661 0.409 864 mir-359 RF00903 2 0.95 92 109 35 0 cm 0.620 0.268 865 mir-392 RF00904 3 2.04 71 86 26 0 cm 0.794 0.510 866 mir-789 RF00905 2 0.56 97 114 36 0 cm 0.590 0.225 867 MIR1122 RF00906 12 1.63 135 152 41 0 cm 0.590 0.325 868 mir-941 RF00907 2 0.64 89 107 33 0 cm 0.641 0.293 869 MIR529 RF00908 3 1.26 131 158 28 0 cm 0.590 0.405 870 mir-883 RF00909 3 1.22 77 94 28 0 cm 0.735 0.413 871 mir-873 RF00910 3 0.99 77 94 25 2 cm 0.734 0.433 872 mir-672 RF00911 7 1.11 100 118 30 0 cm 0.590 0.330 873 mir-877 RF00912 13 1.84 86 113 18 0 cm 0.661 0.498 874 mir-674 RF00914 2 0.66 100 117 32 0 cm 0.589 0.286 875 mir-760 RF00915 7 1.18 80 98 26 0 cm 0.708 0.432 876 mir-708 RF00917 21 1.33 88 108 31 0 cm 0.647 0.339 877 mir-872 RF00918 6 1.49 81 98 25 0 cm 0.701 0.441 878 mir-874 RF00919 4 1.04 78 95 21 0 cm 0.726 0.495 879 MIR444 RF00920 4 1.17 151 240 48 0 cm 0.590 0.318 880 mir-665 RF00921 6 1.05 91 110 27 0 cm 0.627 0.370 881 mir-673 RF00922 2 0.98 76 93 26 0 cm 0.744 0.444 882 MIR1027 RF00925 2 0.72 142 160 43 0 cm 0.591 0.288 883 MIR1151 RF00926 2 0.39 145 163 61 0 cm 0.591 0.181 884 mir-582 RF00927 7 0.87 98 115 28 0 cm 0.590 0.318 885 mir-590 RF00928 10 1.48 97 116 32 0 cm 0.589 0.310 886 mir-574 RF00929 3 0.81 77 94 32 0 cm 0.734 0.356 887 mir-879 RF00931 2 1.10 76 93 27 0 cm 0.743 0.433 888 mir-471 RF00932 2 1.10 78 94 25 0 cm 0.727 0.435 889 mir-875 RF00933 9 1.30 77 94 25 0 cm 0.735 0.454 890 mir-463 RF00934 2 1.18 81 97 23 0 cm 0.700 0.449 891 mir-876 RF00935 3 1.09 81 96 32 0 cm 0.700 0.354 892 mir-744 RF00936 5 0.72 100 117 31 0 cm 0.591 0.304 893 mir-653 RF00937 12 1.15 98 115 32 0 cm 0.590 0.301 894 mir-504 RF00939 6 0.96 83 100 30 0 cm 0.684 0.356 895 mir-327 RF00940 2 1.67 62 78 20 0 cm 0.902 0.659 896 mir-434 RF00941 2 0.87 94 111 31 0 cm 0.608 0.298 897 mir-1224 RF00942 11 1.26 86 103 22 0 cm 0.661 0.448 898 MIR824 RF00943 12 1.73 654 683 54 0 cm 0.590 0.527 899 mir-1226 RF00945 2 1.08 76 92 28 0 cm 0.744 0.445 900 mir-1225 RF00946 7 1.05 94 116 13 0 cm 0.607 0.483 901 mir-929 RF00947 15 1.63 96 124 26 0 cm 0.596 0.375 902 mir-996 RF00948 5 0.98 97 121 35 0 cm 0.591 0.270 903 mir-983 RF00949 3 1.15 99 116 29 0 cm 0.590 0.327 904 mir-927 RF00950 14 1.80 78 96 28 0 cm 0.726 0.436 905 mir-1302 RF00951 24 5.63 52 66 15 0 cm 1.066 0.925 906 mir-650 RF00952 11 1.25 95 112 29 0 cm 0.602 0.351 907 mir-1497 RF00953 2 1.57 74 91 16 0 cm 0.762 0.580 908 MIR1446 RF00954 7 1.51 105 128 36 0 cm 0.590 0.295 909 mir-1829 RF00955 3 1.95 60 75 23 0 cm 0.930 0.634 910 MIR1444 RF00956 3 1.17 85 102 31 0 cm 0.668 0.333 911 mir-663 RF00957 12 1.30 93 113 33 0 cm 0.614 0.317 912 mir-498 RF00958 5 1.43 124 142 43 0 cm 0.591 0.307 913 mir-612 RF00959 6 1.10 101 119 35 0 cm 0.590 0.299 914 mir-661 RF00960 4 1.03 98 124 30 0 cm 0.590 0.336 915 mir-581 RF00961 2 0.68 96 112 34 0 cm 0.595 0.248 916 mir-586 RF00962 2 0.61 99 114 37 0 cm 0.589 0.218 917 mir-642 RF00963 2 0.59 97 112 36 0 cm 0.589 0.228 918 mir-938 RF00964 2 0.89 83 100 32 0 cm 0.683 0.323 919 mir-549 RF00965 2 0.79 96 112 29 0 cm 0.596 0.298 920 mir-676 RF00966 6 1.05 89 106 30 0 cm 0.641 0.345 921 mir-281 RF00967 2 1.18 83 100 29 0 cm 0.685 0.400 922 mir-626 RF00968 6 1.66 96 119 26 0 cm 0.596 0.383 923 mir-556 RF00969 2 1.01 95 111 29 0 cm 0.602 0.315 924 mir-648 RF00970 2 0.75 94 111 27 0 cm 0.608 0.338 925 mir-578 RF00971 3 0.75 96 112 36 0 cm 0.595 0.230 926 mir-651 RF00972 4 0.93 97 113 34 0 cm 0.590 0.264 927 mir-597 RF00973 4 1.06 97 116 32 0 cm 0.590 0.308 928 mir-607 RF00974 3 0.48 96 112 41 0 cm 0.596 0.168 929 MIR845_2 RF00975 2 0.90 131 149 30 0 cm 0.589 0.379 930 mir-583 RF00976 3 1.10 75 91 26 0 cm 0.754 0.438 931 mir-600 RF00977 3 1.29 81 98 25 0 cm 0.701 0.446 932 mir-638 RF00978 6 0.90 100 118 22 0 cm 0.589 0.397 933 mir-553 RF00979 3 2.02 68 84 19 0 cm 0.826 0.613 934 mir-643 RF00980 2 0.74 97 115 31 0 cm 0.591 0.279 935 mir-939 RF00981 3 0.71 82 99 31 0 cm 0.692 0.346 936 mir-662 RF00983 14 0.93 95 113 35 0 cm 0.601 0.301 937 mir-576 RF00984 2 0.62 98 114 38 0 cm 0.591 0.209 938 mir-640 RF00985 3 0.73 96 113 29 0 cm 0.595 0.302 939 mir-920 RF00986 4 1.82 75 91 23 0 cm 0.753 0.522 940 mir-589 RF00987 2 0.61 99 117 34 0 cm 0.590 0.260 941 mir-657 RF00988 2 0.91 98 116 19 0 cm 0.592 0.415 942 mir-492 RF00989 14 1.44 116 134 32 0 cm 0.590 0.359 943 mir-552 RF00990 2 0.71 96 113 34 0 cm 0.595 0.256 944 mir-599 RF00991 11 1.06 95 112 35 0 cm 0.601 0.270 945 mir-593 RF00992 2 0.73 100 117 33 0 cm 0.590 0.290 946 mir-1473 RF00993 2 1.18 84 101 29 0 cm 0.676 0.393 947 mir-1255 RF00994 10 2.46 66 97 21 0 cm 0.850 0.633 948 mir-616 RF00995 3 0.91 97 114 34 0 cm 0.590 0.264 949 mir-631 RF00996 7 2.23 75 91 28 0 cm 0.753 0.471 950 mir-942 RF00997 2 0.71 86 101 36 0 cm 0.661 0.254 951 mir-562 RF00998 14 1.71 95 136 34 0 cm 0.602 0.305 952 mir-924 RF00999 4 3.07 53 69 14 0 cm 1.047 0.894 953 mir-580 RF01000 2 0.56 97 113 40 0 cm 0.591 0.183 954 mir-609 RF01001 2 0.68 95 111 34 0 cm 0.603 0.258 955 mir-936 RF01002 4 1.07 98 116 30 0 cm 0.589 0.335 956 mir-563 RF01003 7 1.99 79 95 28 0 cm 0.717 0.472 957 mir-557 RF01004 2 1.28 71 87 23 0 cm 0.794 0.536 958 MIR530 RF01005 3 1.32 172 202 47 0 cm 0.590 0.355 959 mir-601 RF01006 3 1.12 79 96 20 0 cm 0.717 0.506 960 mir-624 RF01007 2 0.54 98 113 38 0 cm 0.590 0.202 961 mir-636 RF01008 5 0.83 99 127 31 0 cm 0.590 0.302 962 mir-M7 RF01009 2 1.51 77 93 23 0 cm 0.735 0.497 963 mir-632 RF01010 16 1.20 94 114 32 0 cm 0.607 0.330 964 mir-605 RF01011 2 0.71 84 99 36 0 cm 0.676 0.259 965 mir-628 RF01012 9 1.56 95 112 32 0 cm 0.601 0.338 966 mir-577 RF01013 2 0.64 96 111 36 0 cm 0.596 0.233 967 mir-1306 RF01014 8 1.50 74 91 21 0 cm 0.763 0.526 968 mir-885 RF01015 3 1.40 74 90 30 0 cm 0.763 0.415 969 mir-584 RF01016 16 2.15 97 201 37 0 cm 0.590 0.302 970 mir-569 RF01018 13 1.27 96 113 31 0 cm 0.596 0.325 971 mir-922 RF01019 12 1.85 81 97 27 0 cm 0.700 0.453 972 mir-572 RF01020 4 1.91 56 74 22 0 cm 0.994 0.734 973 mir-558 RF01021 3 0.71 94 111 34 0 cm 0.608 0.262 974 mir-611 RF01022 8 2.95 67 87 17 0 cm 0.838 0.689 975 mir-940 RF01023 8 0.65 94 111 34 0 cm 0.607 0.274 976 mir-944 RF01024 2 0.75 88 103 37 0 cm 0.648 0.243 977 mir-934 RF01025 2 0.78 83 98 36 0 cm 0.683 0.281 978 MIR828 RF01026 4 1.83 107 138 19 0 cm 0.589 0.448 979 mir-765 RF01027 2 0.75 114 132 37 0 cm 0.589 0.293 980 mir-633 RF01028 3 1.30 98 117 19 0 cm 0.590 0.411 981 mir-649 RF01029 5 1.17 97 159 35 0 cm 0.589 0.275 982 mir-422 RF01030 3 1.00 90 107 33 0 cm 0.634 0.306 983 mir-639 RF01031 6 1.13 98 115 31 0 cm 0.590 0.341 984 mir-554 RF01032 4 1.39 96 113 18 0 cm 0.597 0.446 985 mir-767 RF01033 14 1.20 110 128 39 0 cm 0.590 0.284 986 mir-618 RF01034 5 0.74 101 118 36 0 cm 0.591 0.262 987 mir-887 RF01035 3 1.44 79 96 23 0 cm 0.717 0.483 988 mir-567 RF01036 9 1.86 95 118 28 0 cm 0.601 0.376 989 mir-644 RF01037 3 0.96 94 111 28 0 cm 0.608 0.351 990 mir-1307 RF01038 7 0.67 100 119 32 0 cm 0.589 0.287 991 mir-937 RF01039 9 1.74 86 103 28 0 cm 0.661 0.408 992 mir-573 RF01040 2 0.86 99 116 29 0 cm 0.589 0.326 993 mir-604 RF01041 2 0.73 94 112 30 0 cm 0.609 0.314 994 mir-891 RF01042 7 1.53 79 95 23 0 cm 0.717 0.478 995 MIR1023 RF01043 4 1.96 165 189 46 0 cm 0.590 0.370 996 mir-345 RF01044 10 1.10 96 113 27 0 cm 0.595 0.358 997 mir-544 RF01045 24 2.22 91 172 30 0 cm 0.627 0.374 998 WLE3 RF01046 10 5.44 44 58 17 0 cm 1.249 1.065 999 HBV_epsilon RF01047 32 1.57 61 76 25 0 cm 0.915 0.583 1000 Sacc_telomerase RF01050 13 1.80 1208 1285 183 9 cm 0.590 0.469 1001 c-di-GMP-I RF01051 155 4.61 87 223 22 1 cm 0.654 0.447 1002 Arthropod_7SK RF01052 19 3.44 445 508 39 1 cm 0.590 0.537 1003 Deinococcus_Y_RNA RF01053 2 0.70 126 144 35 1 cm 0.591 0.328 1004 preQ1-II RF01054 14 1.95 99 209 17 2 cm 0.590 0.429 1005 MOCO_RNA_motif RF01055 160 3.51 135 353 42 3 cm 0.590 0.360 1006 Mg_sensor RF01056 4 1.21 115 134 29 2 cm 0.589 0.367 1007 SAH_riboswitch RF01057 52 4.60 78 319 13 0 cm 0.725 0.603 1008 mir-598 RF01059 24 2.28 97 121 30 0 cm 0.590 0.342 1009 mir-548 RF01061 11 0.97 84 98 40 0 cm 0.677 0.229 1010 mir-253 RF01064 4 0.93 100 117 37 0 cm 0.590 0.255 1011 23S-methyl RF01065 19 2.44 102 134 35 1 cm 0.590 0.302 1012 6C RF01066 18 2.70 75 120 25 1 cm 0.753 0.458 1013 ATPC RF01067 90 2.85 92 120 24 2 cm 0.620 0.422 1014 mini-ykkC RF01068 72 72.00 48 78 13 1 cm 0.944 0.761 1015 purD RF01069 21 3.16 125 162 27 1 cm 0.590 0.399 1016 sucA RF01070 35 2.08 83 121 27 2 cm 0.684 0.423 1017 OLE RF01071 20 1.93 616 695 159 9 cm 0.591 0.374 1018 TMV_UPD-PK3 RF01072 25 25.00 31 50 4 0 cm 1.388 1.359 1019 GP_knot1 RF01073 7 2.81 62 77 8 0 cm 0.902 0.824 1020 RF_site1 RF01074 4 4.00 40 55 5 0 cm 1.158 1.107 1021 TLS-PK1 RF01075 2 0.85 97 114 26 2 cm 0.591 0.334 1022 RF_site2 RF01076 2 1.38 72 88 12 0 cm 0.784 0.651 1023 TLS-PK2 RF01077 4 1.81 66 82 18 0 cm 0.850 0.626 1024 PK-PYVV RF01078 3 2.31 58 73 10 0 cm 0.961 0.834 1025 RF_site3 RF01079 2 2.00 39 54 4 0 cm 1.031 0.964 1026 UPD-PKib RF01080 4 4.00 32 46 7 0 cm 1.251 1.057 1027 SBWMV1_UPD-PKe RF01081 3 3.00 26 40 5 0 cm 1.081 0.989 1028 SBWMV1_UPD-PKh RF01082 2 2.00 25 39 6 0 cm 0.973 0.772 1029 UPD-PK2 RF01083 4 4.00 21 35 5 0 cm 1.398 1.286 1030 TLS-PK3 RF01084 8 1.75 130 183 37 3 cm 0.590 0.311 1031 TLS-PK4 RF01085 2 0.83 118 136 32 2 cm 0.591 0.335 1032 PK-repZ RF01087 6 1.16 150 167 18 0 cm 0.589 0.479 1033 TLS-PK5 RF01088 3 1.73 68 84 18 0 cm 0.827 0.606 1034 PK-repBA RF01089 7 2.12 124 143 19 0 cm 0.590 0.462 1035 RF_site4 RF01090 7 1.99 66 84 10 0 cm 0.850 0.745 1036 PK-SPCSV RF01091 2 1.59 61 76 12 0 cm 0.917 0.753 1037 GP_knot2 RF01092 2 1.64 61 77 7 0 cm 0.917 0.827 1038 RF_site5 RF01093 12 3.40 60 75 11 0 cm 0.931 0.832 1039 RF_site6 RF01094 2 1.10 118 134 11 0 cm 0.589 0.504 1040 PK-CuYV_BPYV RF01095 2 1.75 56 71 12 0 cm 0.993 0.818 1041 PK-HAV RF01096 2 2.00 56 71 10 0 cm 0.904 0.767 1042 RF_site8 RF01097 4 2.43 52 67 6 0 cm 1.066 0.999 1043 RF_site9 RF01098 2 2.00 50 65 5 0 cm 1.000 0.933 1044 PK-IAV RF01099 32 4.18 48 63 5 0 cm 1.150 1.106 1045 PK-BYV RF01100 2 2.00 40 54 7 0 cm 1.075 0.942 1046 TLS-PK6 RF01101 3 3.00 40 55 3 0 cm 1.134 1.095 1047 PK1-TEV_CVMV RF01102 2 2.00 37 51 6 0 cm 0.850 0.716 1048 UPD-PKc RF01103 2 2.00 29 43 5 0 cm 1.014 0.877 1049 SBWMV2_UPD-PKb RF01104 3 3.00 29 43 3 0 cm 1.185 1.126 1050 SBWMV2_UPD-PKl RF01105 2 2.00 27 41 4 0 cm 1.043 0.935 1051 SBWMV1_UPD-PKb RF01106 2 2.00 25 39 3 0 cm 0.983 0.904 1052 SBRMV1_UPD-PKf RF01107 2 2.00 27 41 4 0 cm 1.074 0.972 1053 BMV3_UPD-PK1 RF01108 2 2.00 26 40 5 0 cm 1.048 0.917 1054 SBRMV1_UPD-PKd RF01109 2 2.00 21 35 3 0 cm 1.065 0.959 1055 SBWMV2_UPD-PKk RF01111 4 4.00 21 34 3 0 cm 1.391 1.323 1056 BMV3_UPD-PK3 RF01113 2 2.00 23 37 3 0 cm 0.981 0.874 1057 TMV_UPD-PK1 RF01114 2 2.00 22 36 3 0 cm 1.053 0.958 1058 Yfr1 RF01116 37 5.70 59 90 15 1 cm 0.946 0.782 1059 ciona-mir-92 RF01117 2 1.04 81 98 32 0 cm 0.700 0.341 1060 PK-G12rRNA RF01118 347 1.74 108 124 18 0 cm 0.590 0.436 1061 sR32 RF01119 3 3.00 57 136 0 0 hmm - 0.950 1062 sR33 RF01120 3 3.00 55 133 0 0 hmm - 0.796 1063 sR38 RF01121 3 2.72 59 140 0 0 hmm - 0.945 1064 sR39 RF01122 5 3.93 56 135 0 0 hmm - 0.994 1065 sR35 RF01123 3 3.00 57 136 0 0 hmm - 0.883 1066 sR36 RF01124 5 3.82 55 133 0 0 hmm - 1.011 1067 sR4 RF01125 3 3.00 56 135 0 0 hmm - 0.915 1068 sR41 RF01126 7 6.50 53 123 0 0 hmm - 1.047 1069 sR42 RF01127 3 3.00 63 144 0 0 hmm - 0.856 1070 sR43 RF01128 6 3.62 57 161 0 0 hmm - 0.977 1071 sR44 RF01129 3 3.00 55 133 0 0 hmm - 0.903 1072 sR46 RF01130 7 2.96 56 100 5 0 cm 0.993 0.944 1073 sR47 RF01131 8 7.14 55 124 0 0 hmm - 1.011 1074 sR48 RF01132 2 2.00 59 142 0 0 hmm - 0.595 1075 sR3 RF01133 19 16.13 55 226 0 0 hmm - 1.011 1076 sR30 RF01134 3 3.00 57 136 0 0 hmm - 0.967 1077 sR24 RF01135 3 2.11 55 71 2 0 cm 1.012 0.988 1078 sR28 RF01136 6 6.00 55 127 0 0 hmm - 0.906 1079 sR21 RF01137 2 2.00 67 153 0 0 hmm - 0.480 1080 sR23 RF01138 6 4.83 54 127 0 0 hmm - 1.028 1081 sR2 RF01139 8 8.00 57 127 0 0 hmm - 0.857 1082 sR20 RF01140 6 6.00 56 87 2 0 cm 0.966 0.935 1083 sR18 RF01141 5 5.00 56 129 0 0 hmm - 0.930 1084 sR19 RF01142 3 2.66 63 145 0 0 hmm - 0.889 1085 sR16 RF01143 2 2.00 53 134 0 0 hmm - 0.770 1086 sR17 RF01144 5 5.00 55 128 0 0 hmm - 0.897 1087 sR14 RF01145 8 8.00 54 123 0 0 hmm - 0.958 1088 sR15 RF01146 2 2.00 65 150 0 0 hmm - 0.452 1089 sR12 RF01147 5 5.00 55 155 0 0 hmm - 0.845 1090 sR10 RF01149 4 3.80 54 130 0 0 hmm - 1.028 1091 sR11 RF01150 8 8.00 57 143 0 0 hmm - 0.707 1092 snoU82P RF01151 14 4.47 55 130 0 0 hmm - 1.010 1093 sR1 RF01152 12 12.00 57 121 0 0 hmm - 0.934 1094 sn3060 RF01153 3 1.57 67 84 5 0 cm 0.839 0.774 1095 snoR101 RF01155 5 3.22 66 147 0 0 hmm - 0.850 1096 SNORD123 RF01156 12 2.01 70 88 6 0 cm 0.804 0.737 1097 sn1185 RF01157 5 1.93 66 83 3 0 cm 0.850 0.814 1098 SNORD108 RF01158 4 2.42 71 88 3 0 cm 0.793 0.773 1099 snoU18 RF01159 16 4.11 71 149 0 0 hmm - 0.793 1100 sn2841 RF01160 2 1.50 72 89 4 0 cm 0.783 0.738 1101 SNORD5 RF01161 20 4.29 72 151 0 0 hmm - 0.783 1102 sn668 RF01162 6 1.76 65 82 4 0 cm 0.862 0.813 1103 snoR64a RF01163 4 3.10 77 163 0 0 hmm - 0.735 1104 SNORD107 RF01164 13 2.03 74 91 4 0 cm 0.763 0.723 1105 sn2317 RF01165 4 1.97 70 102 3 0 cm 0.804 0.773 1106 sn3071 RF01166 2 1.43 77 94 4 0 cm 0.735 0.690 1107 sn2429 RF01167 4 1.55 77 95 4 0 cm 0.734 0.692 1108 SNORD126 RF01168 6 1.81 77 94 7 0 cm 0.734 0.662 1109 SNORD112 RF01169 13 2.56 77 95 6 0 cm 0.734 0.679 1110 snoU61 RF01170 8 2.32 84 136 4 0 cm 0.676 0.640 1111 snoR4 RF01171 2 2.00 80 170 0 0 hmm - 0.508 1112 sn2343 RF01172 3 1.54 78 98 4 0 cm 0.725 0.688 1113 snoU105B RF01173 13 2.13 80 96 14 1 cm 0.708 0.571 1114 snoU43 RF01174 11 3.61 79 162 0 0 hmm - 0.716 1115 snoU83D RF01175 8 1.82 81 101 2 0 cm 0.699 0.681 1116 snR78 RF01176 8 2.68 82 126 2 0 cm 0.692 0.671 1117 snR67 RF01177 16 3.57 83 300 0 0 hmm - 0.684 1118 snoR77Y RF01178 21 3.03 85 111 5 0 cm 0.669 0.625 1119 snoU83 RF01179 7 3.33 84 108 3 0 cm 0.676 0.649 1120 snoR110 RF01180 2 1.13 89 106 18 0 cm 0.640 0.456 1121 snR77 RF01181 15 2.73 83 170 0 0 hmm - 0.683 1122 SNORD11 RF01182 19 2.06 84 105 4 0 cm 0.677 0.638 1123 SNORD19B RF01183 17 2.38 84 101 3 0 cm 0.677 0.650 1124 snR79 RF01184 18 3.09 89 178 0 0 hmm - 0.641 1125 snR75 RF01185 61 4.68 87 200 0 0 hmm - 0.654 1126 SNORD127 RF01186 13 1.73 86 104 7 0 cm 0.661 0.597 1127 snR56 RF01188 16 3.97 85 176 0 0 hmm - 0.668 1128 sn1502 RF01189 4 1.28 87 106 5 0 cm 0.654 0.606 1129 snR50 RF01190 3 1.29 89 107 2 0 cm 0.640 0.618 1130 SNORD121A RF01191 26 2.17 82 102 10 0 cm 0.692 0.588 1131 SNORD11B RF01192 37 2.70 87 106 6 0 cm 0.654 0.592 1132 snoR20a RF01193 5 2.31 90 109 3 0 cm 0.633 0.613 1133 sn2903 RF01194 4 1.16 91 109 4 0 cm 0.627 0.589 1134 snR52 RF01195 5 1.77 92 187 0 0 hmm - 0.620 1135 snoZ30a RF01196 10 1.83 92 111 2 0 cm 0.620 0.597 1136 snR39 RF01197 4 1.43 95 122 2 0 cm 0.601 0.584 1137 snoR69Y RF01198 7 2.18 99 129 5 0 cm 0.590 0.550 1138 snR58 RF01199 3 2.04 97 192 0 0 hmm - 0.589 1139 SNORD125 RF01200 16 1.74 97 121 9 0 cm 0.590 0.519 1140 snR40 RF01201 18 3.27 93 181 0 0 hmm - 0.614 1141 sn2991 RF01202 4 1.25 98 116 6 0 cm 0.591 0.535 1142 snR47 RF01203 17 2.02 96 121 3 0 cm 0.595 0.574 1143 snR65 RF01204 5 1.78 100 197 0 0 hmm - 0.574 1144 snR62 RF01205 2 1.12 100 119 3 0 cm 0.590 0.560 1145 snoR109 RF01206 6 1.48 92 157 19 0 cm 0.620 0.451 1146 snR73 RF01207 5 2.08 103 199 0 0 hmm - 0.557 1147 snoR99 RF01208 9 2.09 106 126 14 0 cm 0.590 0.491 1148 snR76 RF01209 15 1.94 101 151 4 0 cm 0.590 0.552 1149 snoU13 RF01210 34 3.24 104 192 0 0 hmm - 0.552 1150 SNORD124 RF01211 18 1.85 104 129 7 0 cm 0.590 0.540 1151 sn2524 RF01212 2 1.50 109 127 3 0 cm 0.590 0.567 1152 snoR103 RF01213 11 2.17 106 126 15 0 cm 0.590 0.484 1153 snR51 RF01214 17 1.99 100 122 3 0 cm 0.590 0.566 1154 snoR97 RF01215 7 1.75 106 127 17 0 cm 0.591 0.466 1155 snR87 RF01216 4 1.27 109 128 2 0 cm 0.591 0.575 1156 snR41 RF01218 18 1.94 111 131 3 0 cm 0.591 0.563 1157 snoR100 RF01219 9 2.18 116 136 15 1 cm 0.591 0.502 1158 snoR104 RF01220 8 2.20 118 137 24 1 cm 0.590 0.436 1159 snoU6-47 RF01221 5 2.46 132 204 4 0 cm 0.589 0.563 1160 sn2417 RF01222 3 1.18 123 142 2 0 cm 0.591 0.578 1161 snR13 RF01223 2 1.15 124 143 2 0 cm 0.591 0.578 1162 snoR80 RF01224 9 1.79 129 177 24 1 cm 0.590 0.447 1163 ACA64 RF01225 30 2.41 128 151 28 1 cm 0.590 0.417 1164 snoZ5 RF01226 8 1.49 113 139 2 0 cm 0.589 0.575 1165 snoR83 RF01227 7 1.50 129 170 33 1 cm 0.589 0.374 1166 snoR111 RF01228 6 1.60 128 155 31 1 cm 0.590 0.395 1167 SNORA84 RF01229 28 1.79 134 156 39 1 cm 0.590 0.353 1168 snoR77 RF01230 5 1.33 131 188 32 1 cm 0.590 0.380 1169 snoR74 RF01231 9 2.03 134 164 25 1 cm 0.589 0.435 1170 snoR442 RF01232 10 3.91 46 61 8 1 cm 1.198 1.125 1171 snoU109 RF01233 26 1.45 134 167 28 1 cm 0.591 0.415 1172 SNORA47 RF01234 20 1.83 138 162 31 1 cm 0.590 0.412 1173 snR68 RF01235 5 0.89 137 157 38 2 cm 0.591 0.326 1174 snoU19 RF01236 3 1.28 144 169 35 2 cm 0.590 0.379 1175 snR161 RF01237 10 2.01 165 202 36 1 cm 0.590 0.417 1176 snR70 RF01238 9 1.04 165 184 52 0 cm 0.589 0.309 1177 snR49 RF01239 6 1.25 170 206 47 2 cm 0.590 0.339 1178 snR85 RF01240 5 1.24 180 204 36 2 cm 0.590 0.418 1179 SNORA81 RF01241 28 1.76 179 201 36 1 cm 0.590 0.430 1180 snR36 RF01242 10 1.49 180 220 51 2 cm 0.589 0.343 1181 snR33 RF01243 5 1.03 183 204 39 1 cm 0.589 0.400 1182 snR4 RF01244 5 1.16 187 206 54 2 cm 0.589 0.342 1183 snR9 RF01245 5 1.02 187 207 38 1 cm 0.590 0.412 1184 snR81 RF01246 3 0.84 188 208 46 2 cm 0.590 0.366 1185 snR32 RF01247 11 1.82 191 233 44 2 cm 0.590 0.390 1186 snR8 RF01248 11 1.89 184 286 34 1 cm 0.590 0.433 1187 snR190 RF01249 10 1.22 198 220 62 2 cm 0.591 0.306 1188 snR189 RF01250 4 0.98 193 213 44 1 cm 0.590 0.387 1189 snR3 RF01251 4 0.99 193 213 45 2 cm 0.590 0.374 1190 snR5 RF01252 11 1.91 196 216 42 2 cm 0.590 0.395 1191 snR46 RF01253 6 1.24 197 230 55 2 cm 0.589 0.345 1192 snR34 RF01254 4 1.09 206 239 40 1 cm 0.591 0.420 1193 snR35 RF01255 11 1.34 204 231 54 2 cm 0.590 0.346 1194 snR43 RF01256 20 2.08 207 243 54 2 cm 0.590 0.372 1195 snR31 RF01257 8 1.48 223 258 55 2 cm 0.590 0.379 1196 snR10 RF01258 15 1.41 245 300 64 3 cm 0.590 0.368 1197 snR63 RF01259 6 0.82 255 275 80 4 cm 0.591 0.298 1198 snR11 RF01260 6 1.33 260 327 71 4 cm 0.589 0.339 1199 snR82 RF01261 5 1.12 270 308 72 1 cm 0.589 0.348 1200 snR44 RF01262 7 1.10 211 230 55 2 cm 0.591 0.358 1201 snR191 RF01263 11 1.58 273 304 77 3 cm 0.590 0.338 1202 snR83 RF01264 5 0.97 308 335 85 2 cm 0.591 0.338 1203 snR42 RF01265 5 0.97 349 372 107 3 cm 0.589 0.318 1204 snR45 RF01266 8 1.61 180 312 0 0 hmm - 0.380 1205 snR37 RF01267 9 1.33 385 453 128 5 cm 0.590 0.291 1206 SCARNA2 RF01268 20 1.84 421 474 88 6 cm 0.590 0.430 1207 snR80 RF01269 6 1.17 176 198 34 1 cm 0.590 0.412 1208 snR84 RF01270 6 1.22 568 605 157 7 cm 0.590 0.348 1209 snR30 RF01271 5 0.83 612 636 184 6 cm 0.591 0.314 1210 snR86 RF01272 5 1.24 1008 1037 334 3 cm 0.589 0.309 1211 sR34 RF01273 4 2.22 54 70 9 0 cm 1.029 0.919 1212 sR45 RF01274 7 3.15 55 103 14 0 cm 1.010 0.883 1213 sR22 RF01275 6 2.01 58 75 12 1 cm 0.961 0.813 1214 sR53 RF01276 3 2.83 60 140 0 0 hmm - 0.931 1215 snoU54 RF01277 28 3.72 67 85 3 0 cm 0.838 0.819 1216 SNORD109A RF01278 7 2.05 67 103 5 0 cm 0.838 0.788 1217 snoR53Y RF01279 7 2.40 79 139 5 0 cm 0.717 0.669 1218 snoR14 RF01280 7 1.88 84 120 4 0 cm 0.676 0.638 1219 snoR35 RF01281 12 3.07 81 98 5 1 cm 0.700 0.665 1220 snoU30 RF01283 5 1.99 86 109 2 0 cm 0.662 0.647 1221 snoR8a RF01284 7 2.01 92 111 4 0 cm 0.620 0.582 1222 snoU31b RF01285 7 2.46 86 111 3 0 cm 0.661 0.634 1223 snoR26 RF01286 8 1.88 94 114 7 0 cm 0.607 0.549 1224 snoR27 RF01287 6 2.18 95 117 7 0 cm 0.601 0.544 1225 snoR31 RF01288 6 2.03 100 117 3 0 cm 0.590 0.566 1226 snoR17 RF01289 2 1.44 110 128 10 1 cm 0.590 0.513 1227 SNORD10 RF01290 22 3.19 139 189 13 0 cm 0.590 0.505 1228 SNORD97 RF01291 20 1.51 142 301 13 0 cm 0.590 0.518 1229 snoR2 RF01292 11 1.38 149 183 35 1 cm 0.590 0.387 1230 ACA59 RF01293 3 1.24 151 221 32 2 cm 0.590 0.411 1231 snoU89 RF01294 16 1.58 270 301 72 3 cm 0.590 0.383 1232 SCARNA7 RF01295 18 1.96 330 373 18 0 cm 0.590 0.546 1233 snoU85 RF01296 21 3.61 329 383 57 2 cm 0.590 0.446 1234 sR40 RF01297 2 1.50 61 77 12 1 cm 0.915 0.760 1235 snoU25 RF01298 3 1.45 69 85 9 0 cm 0.815 0.711 1236 SNORD2 RF01299 17 3.68 70 123 6 0 cm 0.804 0.743 1237 snoU49 RF01300 5 2.50 65 81 8 0 cm 0.863 0.786 1238 snoR4a RF01301 2 1.30 77 94 8 0 cm 0.734 0.645 1239 snoU36a RF01302 15 2.38 90 112 4 0 cm 0.634 0.604 1240 sR49 RF01303 3 2.25 56 73 11 0 cm 0.994 0.868 1241 sR5 RF01304 11 11.00 53 89 3 0 cm 0.926 0.880 1242 sR51 RF01305 4 3.16 56 71 12 0 cm 0.993 0.885 1243 sR52 RF01306 2 1.97 59 76 4 0 cm 0.946 0.899 1244 sR55 RF01307 4 2.15 64 81 2 0 cm 0.875 0.854 1245 sR58 RF01308 5 2.61 55 72 2 0 cm 1.011 0.989 1246 sR60 RF01309 4 2.50 55 71 2 0 cm 1.010 0.990 1247 sR7 RF01310 5 5.00 58 132 0 0 hmm - 0.819 1248 sR9 RF01312 3 3.00 55 89 1 0 cm 0.563 0.547 1249 AHBV_epsilon RF01313 10 2.23 57 72 16 0 cm 0.977 0.792 1250 mir-1227 RF01314 3 0.72 88 105 29 0 cm 0.646 0.345 1251 CRISPR-DR2 RF01315 19 19.00 30 42 6 0 cm 1.334 1.272 1252 CRISPR-DR3 RF01316 20 20.00 30 42 4 0 cm 1.507 1.463 1253 CRISPR-DR4 RF01317 33 33.00 28 40 5 0 cm 1.447 1.401 1254 CRISPR-DR5 RF01318 12 12.00 37 50 7 0 cm 1.291 1.263 1255 CRISPR-DR6 RF01319 7 7.00 30 44 4 0 cm 1.514 1.479 1256 CRISPR-DR7 RF01320 10 10.00 37 50 5 0 cm 1.253 1.221 1257 CRISPR-DR8 RF01321 5 5.00 37 51 7 0 cm 0.969 0.891 1258 CRISPR-DR9 RF01322 7 7.00 37 50 9 0 cm 1.326 1.193 1259 CRISPR-DR10 RF01323 5 5.00 37 51 6 0 cm 1.005 0.955 1260 CRISPR-DR11 RF01324 5 5.00 36 50 7 0 cm 1.380 1.309 1261 CRISPR-DR12 RF01325 5 5.00 30 44 10 0 cm 1.380 1.262 1262 CRISPR-DR13 RF01326 4 4.00 30 44 5 0 cm 1.320 1.240 1263 CRISPR-DR14 RF01327 5 5.00 29 94 0 0 hmm - 1.207 1264 CRISPR-DR17 RF01328 3 3.00 25 39 6 0 cm 1.210 1.069 1265 CRISPR-DR15 RF01329 3 3.00 37 51 9 0 cm 1.054 0.902 1266 CRISPR-DR16 RF01330 6 6.00 37 50 7 0 cm 1.433 1.358 1267 CRISPR-DR18 RF01331 6 6.00 37 51 5 0 cm 1.255 1.214 1268 CRISPR-DR19 RF01332 4 4.00 37 51 8 0 cm 1.140 1.024 1269 CRISPR-DR20 RF01333 3 3.00 36 50 8 0 cm 1.032 0.910 1270 CRISPR-DR21 RF01334 2 2.00 37 52 8 0 cm 1.004 0.852 1271 CRISPR-DR22 RF01335 9 9.00 36 49 7 0 cm 1.271 1.217 1272 CRISPR-DR23 RF01336 3 3.00 36 51 8 0 cm 1.243 1.123 1273 CRISPR-DR24 RF01337 4 4.00 30 44 5 0 cm 1.228 1.156 1274 CRISPR-DR25 RF01338 5 5.00 25 38 6 0 cm 1.411 1.325 1275 CRISPR-DR27 RF01339 3 3.00 25 39 4 0 cm 1.161 1.077 1276 CRISPR-DR29 RF01340 2 2.00 37 51 9 0 cm 1.130 0.968 1277 CRISPR-DR30 RF01341 3 3.00 38 53 6 0 cm 1.032 0.955 1278 CRISPR-DR32 RF01342 2 2.00 37 52 4 0 cm 0.898 0.823 1279 CRISPR-DR33 RF01343 3 3.00 37 52 6 0 cm 0.812 0.736 1280 CRISPR-DR34 RF01344 5 5.00 36 50 8 0 cm 1.338 1.250 1281 CRISPR-DR35 RF01345 2 2.00 36 51 8 0 cm 1.008 0.852 1282 CRISPR-DR36 RF01346 3 3.00 36 50 6 0 cm 1.255 1.166 1283 CRISPR-DR37 RF01347 3 3.00 35 49 7 0 cm 0.987 0.874 1284 CRISPR-DR38 RF01348 5 5.00 35 49 3 0 cm 1.192 1.139 1285 CRISPR-DR40 RF01349 3 3.00 30 44 10 0 cm 1.201 0.971 1286 CRISPR-DR41 RF01350 2 2.00 29 43 8 0 cm 0.989 0.767 1287 CRISPR-DR42 RF01351 3 3.00 29 98 0 0 hmm - 0.953 1288 CRISPR-DR43 RF01352 3 3.00 29 98 0 0 hmm - 0.876 1289 CRISPR-DR44 RF01353 3 3.00 28 42 4 0 cm 1.026 0.936 1290 CRISPR-DR45 RF01354 3 3.00 24 38 6 0 cm 1.181 1.034 1291 CRISPR-DR26 RF01355 4 4.00 25 39 3 0 cm 1.302 1.246 1292 CRISPR-DR28 RF01356 3 3.00 24 38 7 0 cm 1.246 1.088 1293 CRISPR-DR31 RF01357 3 3.00 37 52 10 0 cm 1.177 1.016 1294 CRISPR-DR39 RF01358 3 3.00 31 45 4 0 cm 1.087 0.986 1295 CRISPR-DR46 RF01359 2 2.00 38 53 7 0 cm 0.901 0.767 1296 CRISPR-DR47 RF01360 2 2.00 37 52 4 0 cm 1.054 0.973 1297 CRISPR-DR48 RF01361 2 2.00 37 52 7 0 cm 1.007 0.869 1298 CRISPR-DR49 RF01362 3 3.00 47 62 6 0 cm 1.127 1.045 1299 CRISPR-DR50 RF01363 2 2.00 46 61 13 0 cm 0.890 0.668 1300 CRISPR-DR51 RF01364 2 2.00 38 53 6 0 cm 0.862 0.747 1301 CRISPR-DR52 RF01365 2 2.00 37 52 7 0 cm 1.028 0.895 1302 CRISPR-DR53 RF01366 2 2.00 37 52 9 0 cm 0.996 0.826 1303 CRISPR-DR54 RF01367 2 2.00 37 52 6 0 cm 1.009 0.897 1304 CRISPR-DR55 RF01368 2 2.00 37 112 0 0 hmm - 0.657 1305 CRISPR-DR56 RF01369 2 2.00 37 52 9 0 cm 1.048 0.878 1306 CRISPR-DR57 RF01370 3 3.00 37 51 7 0 cm 1.045 0.939 1307 CRISPR-DR58 RF01371 2 2.00 37 51 5 0 cm 0.981 0.896 1308 CRISPR-DR60 RF01373 2 2.00 37 51 3 0 cm 0.872 0.815 1309 CRISPR-DR61 RF01374 2 2.00 37 52 7 0 cm 1.005 0.869 1310 CRISPR-DR62 RF01375 2 2.00 37 52 4 0 cm 0.983 0.899 1311 CRISPR-DR63 RF01376 2 2.00 37 52 8 0 cm 1.018 0.856 1312 CRISPR-DR64 RF01377 2 2.00 37 52 4 0 cm 1.019 0.935 1313 CRISPR-DR65 RF01378 2 2.00 37 52 7 0 cm 0.898 0.764 1314 CRISPR-DR66 RF01379 4 4.00 37 50 7 0 cm 1.345 1.255 1315 HIV-1_SD RF01380 22 22.00 19 31 7 0 cm 1.720 1.657 1316 HIV-1_SL3 RF01381 19 19.00 23 35 5 0 cm 1.628 1.602 1317 HIV-1_SL4 RF01382 16 16.00 20 32 5 0 cm 1.595 1.562 1318 GRIK4_3p_UTR RF01383 8 1.28 94 125 9 0 cm 0.608 0.531 1319 InvR RF01384 4 1.10 91 108 17 1 cm 0.628 0.462 1320 isrA RF01385 10 1.31 129 147 20 1 cm 0.591 0.461 1321 isrB RF01386 3 1.10 87 107 21 2 cm 0.655 0.440 1322 isrC RF01387 16 0.98 123 141 37 2 cm 0.589 0.328 1323 isrD RF01388 2 2.00 51 66 13 1 cm 1.065 0.877 1324 isrF RF01389 3 1.13 292 313 39 3 cm 0.590 0.473 1325 isrG RF01390 5 0.90 279 312 90 4 cm 0.591 0.304 1326 isrH RF01391 6 0.70 280 301 87 6 cm 0.590 0.292 1327 isrI RF01392 30 1.62 98 115 13 1 cm 0.590 0.492 1328 isrJ RF01393 5 2.09 75 105 15 1 cm 0.753 0.604 1329 isrK RF01394 52 6.66 77 108 18 2 cm 0.734 0.578 1330 isrL RF01395 4 0.97 345 382 94 7 cm 0.589 0.348 1331 isrN RF01396 17 5.63 143 162 25 2 cm 0.590 0.492 1332 isrO RF01397 6 1.02 201 221 64 2 cm 0.591 0.308 1333 isrP RF01398 7 0.74 148 167 44 2 cm 0.590 0.309 1334 isrQ RF01399 6 0.68 162 181 50 3 cm 0.590 0.301 1335 istR RF01400 7 0.99 130 148 44 2 cm 0.590 0.298 1336 rseX RF01401 12 2.11 94 114 13 1 cm 0.607 0.511 1337 STnc150 RF01402 9 1.20 267 326 22 2 cm 0.590 0.519 1338 STnc290 RF01403 6 1.46 65 81 18 1 cm 0.864 0.634 1339 STnc440 RF01404 4 1.20 76 93 15 1 cm 0.742 0.578 1340 STnc490k RF01405 76 0.90 124 142 41 2 cm 0.591 0.277 1341 STnc500 RF01406 8 0.84 285 305 67 4 cm 0.590 0.371 1342 STnc560 RF01407 12 1.05 214 237 39 3 cm 0.589 0.428 1343 sraL RF01408 6 1.06 142 175 38 4 cm 0.591 0.347 1344 STnc250 RF01409 3 0.81 94 112 25 3 cm 0.608 0.357 1345 BsrC RF01410 29 2.99 87 105 12 0 cm 0.654 0.552 1346 BsrF RF01411 11 1.37 113 137 29 2 cm 0.590 0.349 1347 BsrG RF01412 6 2.52 259 368 66 5 cm 0.590 0.371 1348 miR-430 RF01413 46 7.74 89 115 23 0 cm 0.640 0.507 1349 class_I_RNA RF01414 21 5.08 58 94 10 0 cm 0.961 0.868 1350 Flavivirus_SLIV RF01415 20 1.84 75 92 22 2 cm 0.753 0.511 1351 NrrF RF01416 3 0.91 160 179 33 1 cm 0.591 0.396 1352 RSV_RNA RF01417 8 1.27 289 311 53 3 cm 0.590 0.438 1353 HIV_POL-1_SL RF01418 29 1.58 113 130 34 1 cm 0.590 0.349 1354 IsrR RF01419 308 5.27 187 235 11 0 cm 0.590 0.562 1355 snoR113 RF01420 5 1.80 103 159 3 0 cm 0.591 0.571 1356 snoR114 RF01421 24 4.12 87 113 4 0 cm 0.654 0.629 1357 snoR116 RF01422 5 1.97 86 116 3 0 cm 0.661 0.638 1358 snoR117 RF01423 6 2.96 80 118 4 0 cm 0.708 0.677 1359 snoR118 RF01424 8 3.05 92 180 0 0 hmm - 0.620 1360 snoR121 RF01425 2 1.33 88 106 3 0 cm 0.647 0.618 1361 snoR126 RF01426 4 1.94 101 130 4 0 cm 0.590 0.559 1362 snoR127 RF01427 3 1.56 139 170 4 0 cm 0.589 0.566 1363 snoR128 RF01428 5 1.91 91 123 3 0 cm 0.627 0.602 1364 snoR130 RF01429 2 1.21 120 140 3 0 cm 0.590 0.568 1365 snoR134 RF01430 5 1.47 149 170 36 1 cm 0.590 0.388 1366 snoR135 RF01431 6 1.46 143 169 28 1 cm 0.590 0.428 1367 snoR143 RF01432 3 1.68 169 194 38 1 cm 0.590 0.411 1368 snoR137 RF01433 4 1.26 146 180 31 1 cm 0.590 0.404 1369 S_pombe_snR3 RF01434 3 1.05 167 186 43 1 cm 0.590 0.360 1370 S_pombe_snR5 RF01435 3 1.03 143 161 34 1 cm 0.589 0.368 1371 S_pombe_snR33 RF01436 3 1.36 145 168 33 1 cm 0.591 0.396 1372 S_pombe_snR10 RF01437 2 0.85 167 186 34 1 cm 0.591 0.397 1373 S_pombe_snR35 RF01438 4 1.24 172 192 32 1 cm 0.589 0.434 1374 S_pombe_snR36 RF01439 2 0.82 164 183 41 2 cm 0.590 0.352 1375 S_pombe_snR42 RF01440 3 1.42 208 229 38 1 cm 0.590 0.444 1376 S_pombe_snR46 RF01441 2 0.81 168 187 39 1 cm 0.589 0.366 1377 S_pombe_snR90 RF01442 3 1.11 158 176 36 1 cm 0.590 0.381 1378 S_pombe_snR91 RF01443 2 0.93 144 163 24 1 cm 0.590 0.435 1379 S_pombe_snR92 RF01444 3 1.21 144 166 36 1 cm 0.589 0.357 1380 S_pombe_snR94 RF01445 3 1.15 210 236 50 1 cm 0.590 0.376 1381 S_pombe_snR95 RF01446 2 0.78 222 242 60 1 cm 0.591 0.337 1382 S_pombe_snR98 RF01447 2 0.76 212 232 59 2 cm 0.588 0.324 1383 S_pombe_snR93 RF01448 2 0.82 143 162 33 1 cm 0.590 0.373 1384 S_pombe_snR100 RF01449 3 1.26 187 215 57 2 cm 0.590 0.331 1385 S_pombe_snR96 RF01450 2 0.82 211 231 50 1 cm 0.590 0.373 1386 S_pombe_snR97 RF01451 3 0.95 148 166 26 1 cm 0.589 0.430 1387 S_pombe_snR99 RF01452 5 0.97 185 211 50 2 cm 0.592 0.345 1388 RCNMV_TE_DR1 RF01453 3 0.69 138 157 43 4 cm 0.589 0.297 1389 RCNMV_5UTR RF01454 3 1.12 123 141 23 3 cm 0.591 0.417 1390 DPB RF01455 19 1.87 86 102 18 0 cm 0.661 0.505 1391 VrrA RF01456 11 1.24 140 158 32 1 cm 0.590 0.384 1392 rli22 RF01457 6 0.92 111 129 23 1 cm 0.590 0.394 1393 rli23 RF01458 7 1.20 98 115 31 2 cm 0.590 0.314 1394 rliE RF01459 4 1.21 222 243 48 2 cm 0.589 0.395 1395 rliH RF01460 3 0.86 429 452 119 6 cm 0.591 0.334 1396 rli24 RF01461 6 0.93 158 177 35 2 cm 0.590 0.386 1397 rli26 RF01462 5 0.91 188 208 47 4 cm 0.590 0.354 1398 rli27 RF01463 3 1.03 99 117 10 1 cm 0.590 0.495 1399 rliA RF01464 4 0.88 224 245 63 4 cm 0.589 0.325 1400 rli31 RF01465 3 0.89 115 133 31 0 cm 0.591 0.333 1401 rli34 RF01466 5 1.63 84 101 10 1 cm 0.675 0.577 1402 rli36 RF01467 6 1.17 84 101 23 1 cm 0.676 0.424 1403 rli32 RF01468 5 0.80 147 179 47 3 cm 0.589 0.284 1404 rli33 RF01469 3 0.86 532 556 143 7 cm 0.590 0.339 1405 rli38 RF01470 20 4.13 150 195 37 2 cm 0.590 0.398 1406 rliB RF01471 4 1.81 360 392 49 2 cm 0.590 0.484 1407 rli40 RF01472 4 0.95 263 283 81 3 cm 0.589 0.313 1408 rli41 RF01473 6 0.93 494 516 128 6 cm 0.589 0.346 1409 rli42 RF01474 4 0.75 171 202 58 4 cm 0.590 0.273 1410 rli45 RF01475 6 1.70 78 94 14 1 cm 0.725 0.580 1411 rliF RF01476 5 1.45 220 239 47 5 cm 0.591 0.411 1412 rli43 RF01477 4 0.88 255 275 69 4 cm 0.589 0.343 1413 rli47 RF01478 9 0.73 508 539 145 5 cm 0.589 0.319 1414 rli48 RF01479 3 0.87 149 168 41 1 cm 0.589 0.333 1415 rli52 RF01480 6 0.93 95 113 26 2 cm 0.602 0.353 1416 rli53 RF01481 5 0.76 173 193 53 1 cm 0.588 0.294 1417 AdoCbl_riboswitch RF01482 7 1.56 149 175 40 3 cm 0.590 0.339 1418 rli56 RF01483 6 0.75 100 118 31 2 cm 0.591 0.294 1419 rli59 RF01484 5 0.85 181 201 44 2 cm 0.590 0.356 1420 rli61 RF01485 4 0.75 106 124 32 1 cm 0.590 0.295 1421 rli62 RF01486 2 1.25 134 153 33 3 cm 0.590 0.370 1422 rliI RF01487 5 0.67 239 259 81 3 cm 0.589 0.267 1423 rli49 RF01488 5 1.06 163 182 31 2 cm 0.588 0.413 1424 sbrA RF01489 6 1.68 71 87 16 1 cm 0.793 0.613 1425 rli51 RF01490 9 1.02 121 139 31 1 cm 0.589 0.357 1426 rli54 RF01491 5 0.82 528 551 146 8 cm 0.590 0.324 1427 rli28 RF01492 21 6.74 186 222 28 2 cm 0.590 0.507 1428 rli37 RF01493 4 0.92 247 268 57 2 cm 0.590 0.377 1429 rliD RF01494 9 0.87 327 349 83 5 cm 0.591 0.352 1430 ACAT RF01495 8 1.36 147 180 32 2 cm 0.589 0.408 1431 Afu_182 RF01496 19 2.49 196 246 29 1 cm 0.590 0.474 1432 ALIL RF01497 26 2.37 117 135 19 1 cm 0.590 0.470 1433 Afu_190 RF01498 3 2.86 100 192 0 0 hmm - 0.573 1434 Afu_191 RF01499 7 2.57 93 187 0 0 hmm - 0.613 1435 Afu_198 RF01500 6 2.50 149 253 0 0 hmm - 0.393 1436 Afu_199 RF01501 3 3.00 77 162 0 0 hmm - 0.735 1437 Fungi_SRP RF01502 50 14.10 314 1337 117 4 cm 0.590 0.329 1438 Afu_203 RF01503 3 0.76 111 129 35 1 cm 0.590 0.299 1439 Afu_254 RF01504 6 3.82 158 202 12 1 cm 0.590 0.544 1440 Afu_264 RF01505 5 2.69 103 195 0 0 hmm - 0.557 1441 Afu_294 RF01506 10 4.03 83 165 0 0 hmm - 0.684 1442 Afu_298 RF01507 3 2.17 93 187 0 0 hmm - 0.613 1443 BYDV_5_UTR RF01508 4 1.07 149 169 33 3 cm 0.589 0.376 1444 Afu_300 RF01509 10 3.35 92 178 0 0 hmm - 0.621 1445 MFR RF01510 3 2.07 63 79 20 1 cm 0.889 0.625 1446 Afu_304 RF01511 5 2.29 107 203 0 0 hmm - 0.537 1447 Afu_309 RF01512 10 1.95 322 390 90 3 cm 0.590 0.357 1448 Afu_335 RF01513 5 2.38 96 188 0 0 hmm - 0.596 1449 Afu_513 RF01514 7 2.33 103 197 0 0 hmm - 0.557 1450 Afu_514 RF01515 5 2.41 106 201 0 0 hmm - 0.542 1451 v-snoRNA-1 RF01516 2 2.00 65 151 0 0 hmm - 0.658 1452 iscRS RF01517 4 0.88 110 128 29 2 cm 0.590 0.342 1453 pRNA RF01518 23 7.18 90 130 22 0 cm 0.633 0.515 1454 CC0196 RF01519 2 1.75 58 74 9 0 cm 0.962 0.847 1455 CC0734 RF01520 2 1.09 95 112 17 1 cm 0.602 0.446 1456 CC1840 RF01521 3 1.17 95 128 25 1 cm 0.601 0.381 1457 TB10Cs1H1 RF01522 4 1.68 71 88 15 0 cm 0.793 0.633 1458 TB10Cs1H2 RF01523 5 2.11 63 84 19 0 cm 0.888 0.670 1459 TB10Cs1H3 RF01524 5 1.73 73 92 17 0 cm 0.772 0.598 1460 TB10Cs2H1 RF01525 4 2.97 66 94 10 0 cm 0.851 0.771 1461 ceN106 RF01526 3 1.46 77 97 2 0 cm 0.736 0.713 1462 CrfA RF01527 2 0.64 136 154 45 3 cm 0.589 0.274 1463 CC3513 RF01528 2 0.80 173 195 53 2 cm 0.591 0.322 1464 CC3552 RF01529 2 0.96 106 124 28 2 cm 0.589 0.357 1465 CC3664 RF01530 2 0.64 136 155 43 2 cm 0.591 0.291 1466 TB10Cs3H1 RF01531 4 2.00 62 100 18 0 cm 0.903 0.681 1467 TB10Cs3H2 RF01532 6 2.00 69 89 16 0 cm 0.815 0.646 1468 TB10Cs4H3 RF01533 3 2.35 67 83 17 0 cm 0.839 0.669 1469 TB10Cs4H4 RF01534 2 1.69 66 82 18 0 cm 0.851 0.639 1470 TB10Cs5H2 RF01535 5 2.29 78 94 10 0 cm 0.725 0.627 1471 TB10Cs5H3 RF01536 7 3.05 70 93 12 0 cm 0.804 0.682 1472 TB11Cs2H1 RF01537 7 2.26 70 86 17 0 cm 0.804 0.616 1473 TB11Cs3H1 RF01538 4 2.00 72 88 17 0 cm 0.783 0.609 1474 TB11Cs4H1 RF01539 5 2.03 72 88 14 0 cm 0.783 0.628 1475 TB11Cs4H2 RF01540 6 2.67 64 80 16 0 cm 0.876 0.714 1476 TB11Cs4H3 RF01541 3 1.86 74 93 13 0 cm 0.762 0.640 1477 TB11Cs5H1 RF01542 2 1.64 71 87 17 0 cm 0.794 0.599 1478 TB11Cs5H2 RF01543 5 2.40 68 85 17 0 cm 0.827 0.649 1479 TB11Cs5H3 RF01544 5 2.80 65 99 19 0 cm 0.862 0.633 1480 TB3Cs2H1 RF01545 2 1.74 69 85 15 0 cm 0.815 0.656 1481 TB6Cs1H1 RF01546 6 2.14 66 83 16 0 cm 0.850 0.686 1482 TB6Cs1H3 RF01547 5 2.13 64 86 17 0 cm 0.875 0.688 1483 TB6Cs1H4 RF01548 4 1.75 73 98 15 0 cm 0.772 0.613 1484 TB8Cs2H1 RF01549 6 3.67 65 79 18 0 cm 0.862 0.691 1485 TB8Cs3H1 RF01550 7 2.31 63 78 16 0 cm 0.889 0.717 1486 TB8Cs4H2 RF01551 2 1.83 70 86 15 0 cm 0.805 0.653 1487 TB9Cs1H2 RF01552 5 1.84 86 103 8 0 cm 0.661 0.595 1488 TB9Cs1H3 RF01553 3 2.42 65 82 11 0 cm 0.863 0.750 1489 TB9Cs2H1 RF01554 4 1.77 68 86 15 0 cm 0.827 0.662 1490 TB9Cs3H1 RF01555 6 2.72 68 92 16 0 cm 0.826 0.656 1491 TB9Cs3H2 RF01556 3 2.28 63 79 14 0 cm 0.889 0.729 1492 TB9Cs4H1 RF01557 4 2.65 62 90 15 0 cm 0.902 0.738 1493 TB9Cs4H2 RF01558 5 1.61 71 90 16 0 cm 0.792 0.613 1494 DdR1 RF01559 3 2.81 66 197 0 0 hmm - 0.850 1495 DdR10 RF01560 4 2.48 81 169 0 0 hmm - 0.699 1496 DdR11 RF01561 3 2.38 76 163 0 0 hmm - 0.744 1497 DdR12 RF01562 2 2.00 75 164 0 0 hmm - 0.732 1498 DdR13 RF01563 3 2.42 80 168 0 0 hmm - 0.708 1499 DdR14 RF01564 2 2.00 65 151 0 0 hmm - 0.724 1500 DdR15 RF01565 3 1.70 113 215 0 0 hmm - 0.509 1501 DdR16 RF01566 4 2.57 78 164 0 0 hmm - 0.725 1502 DdR17 RF01567 2 2.00 70 157 0 0 hmm - 0.723 1503 DdR18 RF01568 3 1.06 147 172 37 1 cm 0.591 0.354 1504 DdR2 RF01569 3 2.32 83 173 0 0 hmm - 0.684 1505 Dictyostelium_SRP RF01570 3 0.98 283 304 92 3 cm 0.589 0.293 1506 DdR35 RF01571 3 1.74 59 75 15 1 cm 0.945 0.738 1507 DdR4 RF01572 3 1.77 106 205 0 0 hmm - 0.542 1508 DdR5 RF01573 3 2.04 81 171 0 0 hmm - 0.699 1509 DdR6 RF01574 3 2.01 86 178 0 0 hmm - 0.661 1510 DdR7 RF01575 3 1.93 98 196 0 0 hmm - 0.584 1511 DdR8 RF01576 2 1.79 88 182 0 0 hmm - 0.648 1512 RNase_P RF01577 2 0.99 626 649 83 4 cm 0.590 0.464 1513 RUF1 RF01578 3 0.86 264 294 67 4 cm 0.589 0.346 1514 RUF2 RF01579 3 1.11 154 193 42 1 cm 0.590 0.337 1515 RUF3 RF01580 3 0.98 187 209 46 2 cm 0.590 0.358 1516 RUF6-5 RF01581 20 1.15 156 177 51 1 cm 0.589 0.310 1517 RUF4 RF01582 2 0.77 277 297 90 5 cm 0.589 0.271 1518 snoR01 RF01583 3 1.77 83 102 2 0 cm 0.685 0.664 1519 snoR03 RF01584 2 1.07 160 184 38 2 cm 0.589 0.365 1520 snoR07 RF01585 4 1.46 88 107 3 0 cm 0.647 0.614 1521 snoR09 RF01586 3 1.36 84 115 3 0 cm 0.676 0.641 1522 snoR10 RF01587 4 1.66 76 94 4 0 cm 0.743 0.696 1523 snoR13 RF01588 4 1.37 105 125 4 0 cm 0.590 0.559 1524 plasmodium_snoR11 RF01589 2 0.82 207 226 53 2 cm 0.589 0.340 1525 plasmodium_snoR14 RF01590 4 1.42 127 157 3 0 cm 0.591 0.568 1526 snoR15 RF01591 4 1.18 131 150 26 0 cm 0.590 0.407 1527 plasmodium_snoR17 RF01592 5 1.68 80 98 4 0 cm 0.707 0.662 1528 plasmodium_snoR16 RF01593 3 1.49 126 150 2 0 cm 0.589 0.571 1529 snoR18 RF01594 3 1.39 90 117 3 0 cm 0.633 0.600 1530 snoR19 RF01595 4 1.55 96 127 4 0 cm 0.596 0.557 1531 plasmodium_snoR20 RF01596 2 2.00 82 173 0 0 hmm - 0.657 1532 snoR22 RF01597 3 1.42 83 100 4 0 cm 0.684 0.638 1533 snoR23 RF01598 3 1.50 84 102 3 0 cm 0.676 0.646 1534 plasmodium_snoR24 RF01599 4 1.82 82 104 3 0 cm 0.692 0.657 1535 snoR25 RF01600 4 1.78 70 87 4 0 cm 0.804 0.753 1536 plasmodium_snoR26 RF01601 3 1.18 160 181 8 0 cm 0.591 0.542 1537 plasmodium_snoR27 RF01602 4 1.09 143 167 34 1 cm 0.590 0.370 1538 snoR29 RF01603 3 1.51 84 103 4 0 cm 0.675 0.631 1539 plasmodium_snoR28 RF01604 3 1.64 78 97 4 0 cm 0.725 0.678 1540 plasmodium_snoR30 RF01605 3 1.72 74 99 3 0 cm 0.764 0.726 1541 plasmodium_snoR31 RF01606 3 1.10 145 163 36 1 cm 0.590 0.363 1542 ceN100 RF01607 4 1.02 132 152 35 1 cm 0.591 0.349 1543 ceN102 RF01608 4 1.29 142 176 31 1 cm 0.589 0.394 1544 ceN103 RF01609 4 1.51 109 143 3 0 cm 0.591 0.569 1545 ceN104 RF01610 5 1.58 163 346 37 2 cm 0.589 0.399 1546 ceN108 RF01611 3 1.76 70 99 4 0 cm 0.805 0.762 1547 ceN105 RF01612 3 1.23 140 191 41 1 cm 0.590 0.326 1548 ceN109 RF01613 3 2.03 67 97 3 0 cm 0.838 0.808 1549 ceN110 RF01614 3 0.98 126 145 29 1 cm 0.591 0.374 1550 ceN111 RF01615 3 1.83 70 88 3 0 cm 0.803 0.768 1551 ceN113 RF01617 2 1.40 131 150 3 0 cm 0.589 0.570 1552 ceN114 RF01618 3 1.75 63 80 3 0 cm 0.887 0.850 1553 ceN115 RF01619 2 0.71 159 178 40 2 cm 0.590 0.349 1554 ceN125 RF01620 4 0.96 135 156 36 2 cm 0.591 0.343 1555 ceN126 RF01621 3 0.88 131 149 35 1 cm 0.589 0.348 1556 ceN22 RF01622 2 1.37 76 93 4 0 cm 0.742 0.697 1557 ceN23-1 RF01623 3 0.88 100 118 25 0 cm 0.590 0.356 1558 ceN27 RF01624 2 1.44 80 98 3 0 cm 0.708 0.678 1559 ceN28 RF01625 4 1.31 88 106 4 0 cm 0.648 0.608 1560 ceN30 RF01626 4 1.70 73 90 3 0 cm 0.772 0.743 1561 ceN36-1 RF01627 5 1.12 130 150 27 1 cm 0.591 0.411 1562 ceN38 RF01628 3 0.95 137 157 39 1 cm 0.590 0.331 1563 ceN39 RF01629 4 0.75 131 150 39 1 cm 0.590 0.312 1564 ceN40 RF01630 4 1.37 123 143 3 0 cm 0.590 0.568 1565 ceN41 RF01631 3 1.05 137 155 34 1 cm 0.589 0.364 1566 ceN42 RF01632 3 1.03 130 149 35 1 cm 0.590 0.353 1567 ceN43 RF01633 4 0.92 129 147 33 1 cm 0.591 0.349 1568 ceN44 RF01634 3 1.53 74 91 3 0 cm 0.764 0.730 1569 ceN45 RF01635 4 1.07 128 146 37 1 cm 0.591 0.336 1570 ceN46 RF01636 3 0.89 125 144 30 1 cm 0.591 0.373 1571 ceN47 RF01637 6 1.90 155 177 3 0 cm 0.591 0.570 1572 ceN48 RF01638 5 0.92 125 143 32 1 cm 0.590 0.356 1573 ceN49 RF01639 3 0.89 134 154 34 1 cm 0.590 0.352 1574 ceN51 RF01640 3 0.80 141 161 39 1 cm 0.591 0.333 1575 ceN53 RF01641 3 1.57 74 91 4 0 cm 0.762 0.722 1576 ceN54 RF01642 3 1.80 68 85 2 0 cm 0.827 0.806 1577 ceN56 RF01643 4 1.00 125 148 28 1 cm 0.590 0.382 1578 ceN59 RF01644 3 1.29 137 163 26 1 cm 0.590 0.429 1579 ceN58 RF01645 3 0.83 139 158 40 1 cm 0.590 0.323 1580 ceN63 RF01646 3 1.64 69 86 3 0 cm 0.814 0.777 1581 ceN61 RF01647 4 1.57 76 93 3 0 cm 0.743 0.710 1582 ceN65 RF01648 3 1.74 65 82 3 0 cm 0.862 0.825 1583 ceN67 RF01649 3 1.33 130 150 37 1 cm 0.590 0.352 1584 ceN68 RF01650 2 0.82 121 139 29 1 cm 0.590 0.369 1585 ceN69 RF01651 4 1.18 107 125 5 0 cm 0.589 0.548 1586 ceN70 RF01652 3 1.70 71 88 3 0 cm 0.792 0.761 1587 ceN80 RF01653 5 1.00 131 149 39 1 cm 0.591 0.324 1588 ceN82 RF01654 6 1.01 135 153 30 1 cm 0.590 0.394 1589 ceN84 RF01655 5 1.18 130 149 36 1 cm 0.590 0.341 1590 ceN72-3_ceN74-2 RF01656 13 1.60 131 175 37 2 cm 0.590 0.349 1591 ceN81 RF01658 3 0.82 126 144 40 1 cm 0.590 0.289 1592 ceN86 RF01659 2 1.06 124 142 31 1 cm 0.589 0.370 1593 ceN88 RF01660 6 0.93 140 159 36 2 cm 0.589 0.357 1594 ceN92 RF01661 4 1.29 126 155 30 1 cm 0.591 0.382 1595 ceN89 RF01662 4 1.64 78 95 4 0 cm 0.726 0.687 1596 ceN93 RF01663 4 0.89 131 152 41 1 cm 0.590 0.298 1597 ceN101 RF01664 4 0.84 128 146 39 1 cm 0.590 0.310 1598 P13 RF01665 2 1.15 76 92 26 2 cm 0.743 0.459 1599 rox2 RF01666 4 1.75 71 88 18 0 cm 0.794 0.600 1600 rox1 RF01667 3 1.77 59 74 23 0 cm 0.945 0.636 1601 P10 RF01668 8 3.18 72 89 16 1 cm 0.783 0.649 1602 P14 RF01669 4 1.43 146 165 36 2 cm 0.590 0.392 1603 P17 RF01670 3 0.64 282 303 88 6 cm 0.590 0.294 1604 P18 RF01671 4 1.23 135 153 41 2 cm 0.589 0.346 1605 P2 RF01672 7 0.53 138 157 47 2 cm 0.589 0.261 1606 PhrS RF01673 13 3.21 213 249 21 3 cm 0.590 0.528 1607 P27 RF01674 4 0.92 192 212 56 3 cm 0.589 0.332 1608 CrcZ RF01675 19 2.09 398 452 54 4 cm 0.590 0.484 1609 P31 RF01676 4 1.28 82 99 18 1 cm 0.691 0.508 1610 P35 RF01677 2 1.31 62 78 23 1 cm 0.903 0.605 1611 P37 RF01678 2 1.54 62 77 23 1 cm 0.903 0.612 1612 P36 RF01679 2 1.36 61 77 21 1 cm 0.916 0.628 1613 P5 RF01680 2 1.28 71 88 20 2 cm 0.794 0.567 1614 P4 RF01681 2 0.68 215 235 70 3 cm 0.591 0.290 1615 P8 RF01682 2 1.04 78 95 25 1 cm 0.726 0.439 1616 P6 RF01683 3 0.70 510 540 151 8 cm 0.591 0.313 1617 mascRNA-menRNA RF01684 53 4.49 56 86 21 2 cm 0.993 0.757 1618 6S-Flavo RF01685 82 2.11 109 153 17 0 cm 0.590 0.452 1619 Acido-1 RF01686 4 2.64 64 84 17 1 cm 0.875 0.673 1620 Acido-Lenti-1 RF01687 87 87.00 46 57 13 1 cm 1.136 0.892 1621 Actino-pnp RF01688 77 5.42 66 109 22 0 cm 0.850 0.657 1622 AdoCbl-variant RF01689 144 2.29 131 173 30 3 cm 0.590 0.394 1623 Bacillaceae-1 RF01690 95 7.06 67 83 17 1 cm 0.838 0.622 1624 Bacillus-plasmid RF01691 31 6.20 61 146 9 0 cm 0.916 0.824 1625 Bacteroid-trp RF01692 35 7.39 131 207 24 0 cm 0.590 0.462 1626 Bacteroidales-1 RF01693 41 2.40 179 209 23 1 cm 0.590 0.483 1627 Bacteroides-1 RF01694 40 2.48 83 110 19 1 cm 0.684 0.497 1628 C4 RF01695 456 5.41 87 125 27 1 cm 0.654 0.385 1629 Chlorobi-1 RF01696 15 3.24 67 82 18 1 cm 0.838 0.635 1630 Chlorobi-RRM RF01697 18 2.50 73 94 22 1 cm 0.773 0.544 1631 Chloroflexi-1 RF01698 3 1.22 84 101 21 1 cm 0.676 0.463 1632 Clostridiales-1 RF01699 194 4.01 166 217 62 2 cm 0.590 0.270 1633 Collinsella-1 RF01700 6 1.38 196 302 52 3 cm 0.591 0.349 1634 Cyano-1 RF01701 265 11.19 69 138 14 0 cm 0.815 0.638 1635 Cyano-2 RF01702 57 3.35 204 256 46 2 cm 0.590 0.418 1636 Dictyoglomi-1 RF01703 4 0.75 236 259 81 1 cm 0.590 0.272 1637 Downstream-peptide RF01704 627 11.99 60 189 13 1 cm 0.931 0.708 1638 Flavo-1 RF01705 201 6.16 76 257 19 0 cm 0.744 0.515 1639 Gut-1 RF01706 38 5.14 77 164 21 2 cm 0.735 0.492 1640 JUMPstart RF01707 128 128.00 38 49 5 0 cm 1.363 1.276 1641 L17DE RF01708 52 4.02 76 322 22 1 cm 0.744 0.509 1642 Lacto-rpoB RF01709 31 28.00 58 74 12 0 cm 0.961 0.778 1643 Lacto-usp RF01710 6 1.84 90 108 20 0 cm 0.633 0.424 1644 Lnt RF01711 10 3.47 63 109 6 0 cm 0.889 0.827 1645 Methylobacterium-1 RF01712 34 2.71 104 130 28 2 cm 0.590 0.360 1646 Moco-II RF01713 7 7.00 46 72 9 0 cm 1.057 0.927 1647 Ocean-V RF01714 3 1.70 72 89 11 1 cm 0.783 0.651 1648 Pedo-repair RF01715 6 0.96 211 232 65 2 cm 0.590 0.304 1649 PhotoRC-I RF01716 65 5.54 44 58 12 1 cm 1.249 1.087 1650 PhotoRC-II RF01717 445 3.75 95 217 13 1 cm 0.602 0.458 1651 Polynucleobacter-1 RF01718 16 3.35 142 167 30 4 cm 0.590 0.389 1652 Pseudomon-1 RF01719 19 1.18 116 134 22 1 cm 0.591 0.423 1653 Pseudomon-Rho RF01720 16 1.45 102 125 20 1 cm 0.589 0.426 1654 Pseudomon-groES RF01721 18 1.45 111 134 28 4 cm 0.590 0.375 1655 Pyrobac-1 RF01722 8 4.79 60 80 14 0 cm 0.931 0.770 1656 Rhizobiales-2 RF01723 15 1.16 104 123 30 2 cm 0.590 0.321 1657 SAM-Chlorobi RF01724 9 1.50 87 111 23 1 cm 0.655 0.423 1658 SAM-I-IV-variant RF01725 437 4.27 98 186 24 2 cm 0.590 0.382 1659 SAM-II_long_loops RF01726 126 5.65 60 177 8 0 cm 0.931 0.864 1660 SAM-SAH RF01727 53 25.36 49 62 10 0 cm 1.128 1.006 1661 STAXI RF01728 30 3.83 152 204 33 3 cm 0.590 0.411 1662 Termite-flg RF01729 13 1.27 104 129 30 1 cm 0.590 0.325 1663 Termite-leu RF01730 20 2.30 98 147 30 1 cm 0.590 0.293 1664 TwoAYGGAY RF01731 210 12.35 168 192 45 1 cm 0.590 0.362 1665 asd RF01732 31 1.34 143 216 43 4 cm 0.590 0.303 1666 atoC RF01733 8 2.88 93 117 19 1 cm 0.614 0.425 1667 crcB RF01734 287 24.00 63 333 10 0 cm 0.889 0.788 1668 epsC RF01735 30 1.20 117 142 36 3 cm 0.590 0.318 1669 flg-Rhizobiales RF01736 13 1.64 143 167 35 2 cm 0.590 0.374 1670 flpD RF01737 8 8.00 47 61 14 0 cm 1.126 0.874 1671 gabT RF01738 17 4.69 61 80 20 0 cm 0.916 0.686 1672 glnA RF01739 956 7.25 61 419 16 1 cm 0.916 0.708 1673 gyrA RF01740 18 2.49 88 104 27 1 cm 0.647 0.399 1674 hopC RF01741 4 1.98 61 77 13 0 cm 0.915 0.747 1675 lactis-plasmid RF01742 14 0.96 106 124 38 1 cm 0.590 0.235 1676 leu-phe_leader RF01743 9 1.47 162 190 34 2 cm 0.589 0.399 1677 livK RF01744 8 1.57 84 101 27 1 cm 0.676 0.397 1678 manA RF01745 189 6.18 190 341 52 6 cm 0.590 0.386 1679 mraW RF01746 45 4.16 108 141 36 0 cm 0.590 0.321 1680 msiK RF01747 120 7.93 60 79 13 0 cm 0.931 0.786 1681 nuoG RF01748 31 22.37 44 413 7 0 cm 1.249 1.111 1682 pan RF01749 74 8.64 93 276 21 1 cm 0.614 0.439 1683 pfl RF01750 182 3.24 91 363 22 2 cm 0.627 0.445 1684 potC RF01751 136 3.20 70 91 17 0 cm 0.804 0.630 1685 psaA RF01752 31 1.20 195 219 62 3 cm 0.589 0.310 1686 psbNH RF01753 39 5.04 60 74 12 0 cm 0.930 0.819 1687 radC RF01754 130 5.50 149 179 35 3 cm 0.590 0.405 1688 rmf RF01755 16 1.41 132 151 28 3 cm 0.591 0.398 1689 rne-II RF01756 16 1.34 296 628 72 6 cm 0.590 0.377 1690 sbcD RF01757 6 0.88 155 185 51 4 cm 0.591 0.285 1691 sucA-II RF01758 17 1.24 218 247 63 3 cm 0.591 0.333 1692 sucC RF01759 18 2.35 70 88 11 0 cm 0.804 0.684 1693 traJ-II RF01760 47 2.96 104 126 33 1 cm 0.590 0.302 1694 wcaG RF01761 118 3.16 98 128 18 2 cm 0.590 0.418 1695 whalefall-1 RF01762 14 4.10 56 70 16 1 cm 0.994 0.775 1696 ykkC-III RF01763 39 7.40 67 103 12 1 cm 0.838 0.702 1697 yjdF RF01764 62 1.87 101 214 24 2 cm 0.590 0.377 1698 srg1 RF01765 2 0.89 556 579 152 9 cm 0.590 0.340 1699 cspA RF01766 15 1.86 428 464 124 9 cm 0.590 0.358 1700 SMK_box_riboswitch RF01767 25 2.23 84 175 17 1 cm 0.676 0.515 1701 flavi_FSE RF01768 7 2.10 62 77 11 0 cm 0.903 0.782 1702 greA RF01769 25 1.93 124 143 26 3 cm 0.590 0.426 1703 rimP RF01770 46 2.60 111 244 13 1 cm 0.590 0.514 1704 rnk_leader RF01771 13 2.04 109 133 19 1 cm 0.591 0.459 1705 rnk_pseudo RF01772 15 4.20 108 139 23 1 cm 0.590 0.456 1706 rpsL_psuedo RF01773 9 1.11 128 172 35 3 cm 0.590 0.354 1707 rpsL_ricks RF01774 7 1.15 131 162 30 2 cm 0.590 0.370 1708 RsaOG RF01775 7 1.26 148 181 29 1 cm 0.591 0.420 1709 RatA RF01776 16 2.89 90 109 10 1 cm 0.633 0.557 1710 Evf-2_5p RF01778 13 1.74 142 251 0 0 hmm - 0.411 1711 AS1726 RF01779 2 0.97 78 95 23 1 cm 0.725 0.462 1712 AS1890 RF01780 2 0.75 109 128 28 2 cm 0.592 0.352 1713 ASdes RF01781 26 3.01 68 84 21 1 cm 0.826 0.636 1714 ASpks RF01782 77 3.10 75 94 15 1 cm 0.753 0.623 1715 b55 RF01783 2 1.33 61 77 22 1 cm 0.917 0.613 1716 bablM RF01784 12 1.91 70 86 11 1 cm 0.805 0.686 1717 blv_FSE RF01785 2 2.00 27 41 6 0 cm 1.058 0.917 1718 c-di-GMP-II RF01786 54 4.64 85 180 22 0 cm 0.669 0.458 1719 drz-agam-1 RF01787 7 2.65 82 122 22 1 cm 0.692 0.547 1720 drz-agam-2-2 RF01788 5 1.46 191 232 36 3 cm 0.589 0.426 1721 EBER1 RF01789 3 0.85 166 255 51 4 cm 0.591 0.311 1722 htlv_FSE RF01790 8 4.70 43 57 14 0 cm 1.277 1.129 1723 F6 RF01791 16 4.40 58 72 20 0 cm 0.961 0.752 1724 eiav_FSE RF01792 5 5.00 35 48 5 0 cm 1.453 1.402 1725 ffh RF01793 89 22.56 52 89 11 0 cm 1.066 0.926 1726 sok RF01794 91 5.31 158 475 27 1 cm 0.590 0.469 1727 FourU RF01795 3 1.62 65 81 21 1 cm 0.862 0.607 1728 frnS RF01796 16 1.44 119 140 34 2 cm 0.591 0.352 1729 fstAT RF01797 22 1.88 94 124 18 1 cm 0.607 0.456 1730 g2 RF01798 2 1.30 67 82 21 0 cm 0.837 0.573 1731 gadd7 RF01800 2 0.68 754 779 239 11 cm 0.589 0.285 1732 HSUR RF01802 4 1.42 123 181 16 1 cm 0.589 0.469 1733 GABA3 RF01803 52 2.96 54 69 21 0 cm 1.028 0.801 1734 Lambda_thermo RF01804 5 2.08 59 75 20 0 cm 0.946 0.723 1735 GIR1 RF01807 12 1.61 199 274 46 4 cm 0.590 0.386 1736 MicX RF01808 10 1.44 194 215 49 3 cm 0.590 0.379 1737 symR RF01809 20 1.79 77 93 29 1 cm 0.734 0.440 1738 pntA RF01810 10 1.99 62 78 18 1 cm 0.902 0.688 1739 PtaRNA1 RF01811 16 2.11 72 89 21 1 cm 0.783 0.555 1740 Pxr RF01812 2 0.60 109 127 37 2 cm 0.591 0.261 1741 rdlD RF01813 52 2.60 66 82 17 0 cm 0.851 0.689 1742 rhtB RF01814 14 2.46 83 100 13 0 cm 0.684 0.576 1743 rpsB RF01815 4 3.34 144 263 21 1 cm 0.590 0.461 1744 RsaA RF01816 7 1.47 134 159 41 2 cm 0.590 0.315 1745 RsaB RF01817 2 1.85 60 76 15 2 cm 0.930 0.726 1746 RsaC RF01818 3 0.81 440 463 116 9 cm 0.589 0.327 1747 RsaD RF01819 8 1.22 189 225 42 3 cm 0.591 0.385 1748 RsaE RF01820 15 1.45 112 142 29 2 cm 0.591 0.345 1749 RsaH RF01821 5 1.49 123 155 29 3 cm 0.590 0.389 1750 RsaJ RF01822 3 0.80 287 308 79 4 cm 0.591 0.328 1751 rspL RF01823 6 1.23 88 120 22 1 cm 0.647 0.424 1752 RUF20 RF01824 6 1.74 425 524 76 8 cm 0.590 0.445 1753 RUF21 RF01825 5 2.01 690 867 74 5 cm 0.590 0.510 1754 SAM_V RF01826 6 2.45 66 84 4 0 cm 0.851 0.803 1755 SAR11_0636 RF01827 13 1.11 90 107 23 1 cm 0.633 0.398 1756 SprD RF01828 2 0.71 142 161 47 3 cm 0.589 0.276 1757 sR6 RF01829 2 1.89 53 69 8 1 cm 1.047 0.936 1758 StyR-44 RF01830 34 1.87 107 141 26 1 cm 0.590 0.386 1759 THF RF01831 97 2.17 100 211 30 1 cm 0.590 0.319 1760 ROSE_2 RF01832 14 2.01 73 91 16 1 cm 0.773 0.600 1761 astro_FSE RF01833 4 2.22 55 69 7 0 cm 1.011 0.930 1762 fiv_FSE RF01834 5 5.00 35 48 5 0 cm 1.466 1.417 1763 HIV_FS2 RF01835 19 3.98 45 60 16 0 cm 1.223 1.046 1764 weev_FSE RF01836 6 6.00 27 40 11 0 cm 1.378 1.235 1765 toga_FSE RF01837 3 3.00 29 43 11 0 cm 1.282 1.092 1766 sobemo_FSE RF01838 5 2.49 79 98 12 0 cm 0.717 0.600 1767 eeev_FSE RF01839 6 1.50 73 89 10 0 cm 0.772 0.663 1768 ovine_lenti_FSE RF01840 14 2.70 54 69 10 1 cm 1.028 0.919 1769 veev_FSE RF01841 10 1.78 71 87 9 0 cm 0.793 0.701 1770 mycoplasma_FSE RF01842 3 1.09 87 104 11 0 cm 0.654 0.540 1771 neisseria_FSE RF01843 4 3.82 40 54 13 0 cm 1.367 1.216 1772 SmY RF01844 61 7.08 80 106 15 1 cm 0.708 0.569 1773 enod40 RF01845 35 9.10 269 451 17 2 cm 0.590 0.561 1774 Fungi_U3 RF01846 66 4.32 276 565 79 3 cm 0.590 0.373 1775 Plant_U3 RF01847 24 2.96 221 251 70 3 cm 0.590 0.331 1776 ACEA_U3 RF01848 28 9.38 220 445 51 3 cm 0.590 0.409 1777 alpha_tmRNA RF01849 111 3.51 338 1417 35 2 cm 0.590 0.507 1778 beta_tmRNA RF01850 7 1.94 331 470 51 4 cm 0.589 0.467 1779 cyano_tmRNA RF01851 27 1.47 288 361 67 6 cm 0.590 0.398 1780 tRNA-Sec RF01852 109 2.32 91 117 30 3 cm 0.627 0.322 1781 mtDNA_ssA RF01853 53 3.07 106 126 30 2 cm 0.590 0.384 1782 Bacteria_large_SRP RF01854 92 1.63 255 291 98 2 cm 0.590 0.260 1783 Plant_SRP RF01855 63 2.32 305 337 123 4 cm 0.590 0.286 1784 Protozoa_SRP RF01856 18 5.63 241 410 82 3 cm 0.590 0.318 1785 Archaea_SRP RF01857 53 3.41 318 346 132 3 cm 0.590 0.268 1786 RsaF RF01858 4 0.75 119 136 38 2 cm 0.590 0.286 1787 Phe_leader RF01859 71 3.57 125 169 40 2 cm 0.590 0.342 1788 Afu_455 RF01860 6 2.61 92 182 0 0 hmm - 0.620 1789 TB9Cs1H1 RF01861 4 2.75 63 90 11 0 cm 0.889 0.770 1790 TB10Cs4H2 RF01862 4 2.54 67 91 16 0 cm 0.839 0.645 1791 TB10Cs2H2 RF01863 3 1.39 67 83 16 0 cm 0.838 0.649 1792 plasmodium_snoR21 RF01864 4 1.38 145 168 4 0 cm 0.589 0.562 1793 Vg1_ribozyme RF01865 4 1.32 142 159 41 3 cm 0.590 0.344 1794 ceN33 RF01866 5 1.38 118 140 4 0 cm 0.592 0.563 1795 CC2171 RF01867 13 2.05 138 340 29 3 cm 0.590 0.411 1796 MALAT1 RF01871 17 2.74 95 193 0 0 hmm - 0.601 1797 MEG3_2 RF01872 16 2.06 105 202 0 0 hmm - 0.547 1798 PISRT1 RF01873 18 2.18 107 204 0 0 hmm - 0.537 1799 MIAT_exon1 RF01874 10 1.47 135 244 0 0 hmm - 0.432 1800 MIAT_exon5_1 RF01875 9 1.34 146 261 0 0 hmm - 0.401 1801 MIAT_exon5_2 RF01876 10 2.39 83 171 0 0 hmm - 0.685 1802 MIAT_exon5_3 RF01877 16 1.56 382 536 0 0 hmm - 0.381 1803 TUSC7 RF01879 25 1.51 165 198 24 3 cm 0.590 0.472 1804 Xist_exon1 RF01880 24 4.32 85 166 0 0 hmm - 0.669 1805 Xist_exon4 RF01881 25 1.71 126 231 0 0 hmm - 0.459 1806 TUG1_1 RF01882 21 1.53 145 266 0 0 hmm - 0.402 1807 TUG1_2 RF01883 17 2.44 89 180 0 0 hmm - 0.640 1808 LINC00901 RF01884 30 1.42 152 176 33 1 cm 0.589 0.409 1809 HSR-omega_1 RF01885 13 2.35 78 166 0 0 hmm - 0.726 1810 HSR-omega_2 RF01886 10 2.55 87 177 0 0 hmm - 0.655 1811 DLX6-AS1_1 RF01887 15 1.42 180 301 0 0 hmm - 0.380 1812 DLX6-AS1_2 RF01888 19 1.54 207 332 0 0 hmm - 0.379 1813 lincRNA-p21_1 RF01889 2 1.19 174 296 0 0 hmm - 0.380 1814 lincRNA-p21_2 RF01890 2 2.00 52 133 0 0 hmm - 0.707 1815 TUG1_3 RF01891 24 1.57 236 365 0 0 hmm - 0.379 1816 TUG1_4 RF01892 25 1.57 180 298 0 0 hmm - 0.380 1817 PCA3_2 RF01894 20 1.44 409 574 0 0 hmm - 0.381 1818 mir-193 RF01895 17 1.69 103 123 23 0 cm 0.591 0.414 1819 mir-142 RF01896 13 0.97 106 124 31 0 cm 0.590 0.312 1820 mir-188 RF01897 14 2.00 107 124 21 0 cm 0.590 0.440 1821 mir-363 RF01898 7 0.95 88 105 26 0 cm 0.646 0.374 1822 mir-2241 RF01899 10 1.61 99 116 25 0 cm 0.590 0.376 1823 mir-2024 RF01900 7 0.99 92 109 30 0 cm 0.619 0.316 1824 mir-284 RF01901 10 0.75 98 116 34 1 cm 0.590 0.258 1825 MIR439 RF01902 5 0.60 96 113 37 0 cm 0.596 0.222 1826 mir-500 RF01903 26 1.68 90 107 25 0 cm 0.633 0.409 1827 HOTAIR_1 RF01904 9 8.20 37 101 0 0 hmm - 1.472 1828 HOTAIR_2 RF01905 11 2.90 69 152 0 0 hmm - 0.816 1829 HOTAIR_3 RF01906 17 2.20 98 192 0 0 hmm - 0.585 1830 CDKN2B-AS RF01909 25 2.12 150 256 0 0 hmm - 0.389 1831 mir-506 RF01910 8 0.91 87 104 33 0 cm 0.654 0.295 1832 MIR2118 RF01911 7 2.05 170 216 43 0 cm 0.590 0.388 1833 mir-2807 RF01912 7 1.12 117 134 36 0 cm 0.590 0.319 1834 mir-2778 RF01913 7 0.89 100 117 29 0 cm 0.590 0.312 1835 mir-932 RF01914 5 1.58 96 112 34 0 cm 0.596 0.312 1836 mir-2238 RF01915 4 1.25 120 138 31 0 cm 0.591 0.361 1837 mir-988 RF01916 4 1.10 95 115 31 0 cm 0.601 0.311 1838 MIR2587 RF01917 4 0.71 105 127 35 0 cm 0.590 0.268 1839 mir-1249 RF01918 4 0.71 106 124 29 0 cm 0.591 0.332 1840 mir-1419 RF01919 5 1.14 110 127 27 1 cm 0.591 0.377 1841 mir-764 RF01920 6 0.86 110 128 30 0 cm 0.590 0.335 1842 mir-1296 RF01921 6 0.78 112 130 32 0 cm 0.590 0.330 1843 mir-654 RF01922 6 1.34 104 123 26 0 cm 0.591 0.380 1844 mir-711 RF01923 5 1.07 96 114 24 0 cm 0.596 0.369 1845 mir-2774 RF01924 4 1.49 75 91 17 0 cm 0.753 0.569 1846 MIR1428 RF01925 5 0.81 124 142 39 0 cm 0.589 0.290 1847 mir-981 RF01926 3 1.79 114 137 26 0 cm 0.590 0.416 1848 MIR1222 RF01927 5 2.12 134 158 39 0 cm 0.590 0.368 1849 Mico1 RF01928 3 1.29 205 333 0 0 hmm - 0.380 1850 bxd_1 RF01929 6 2.23 86 179 0 0 hmm - 0.662 1851 bxd_2 RF01930 5 2.23 91 183 0 0 hmm - 0.628 1852 bxd_3 RF01931 4 1.53 137 246 0 0 hmm - 0.424 1853 bxd_4 RF01932 5 2.08 106 203 0 0 hmm - 0.541 1854 bxd_5 RF01933 5 2.81 57 136 0 0 hmm - 0.978 1855 bxd_6 RF01934 6 2.14 93 187 0 0 hmm - 0.613 1856 bxd_7 RF01935 3 2.60 66 150 0 0 hmm - 0.850 1857 mir-63 RF01936 5 0.70 116 133 48 0 cm 0.589 0.205 1858 mir-2780 RF01937 4 0.85 88 106 28 0 cm 0.647 0.359 1859 mir-1251 RF01938 4 1.00 84 101 22 0 cm 0.678 0.442 1860 mir-761 RF01939 4 1.20 67 83 26 0 cm 0.838 0.498 1861 hvt-mir-H RF01940 4 1.79 90 107 20 0 cm 0.633 0.459 1862 MIR1223 RF01941 8 2.99 134 197 25 0 cm 0.590 0.467 1863 mir-1937 RF01942 171 4.39 120 157 11 0 cm 0.590 0.529 1864 mir-999 RF01943 4 1.71 120 139 32 0 cm 0.590 0.390 1865 mir-2518 RF01944 4 0.80 105 123 29 1 cm 0.590 0.333 1866 mir-1388 RF01945 4 1.26 104 121 28 0 cm 0.589 0.363 1867 KCNQ1OT1_1 RF01946 8 1.53 464 635 0 0 hmm - 0.380 1868 KCNQ1OT1_2 RF01947 18 1.58 196 318 0 0 hmm - 0.379 1869 KCNQ1OT1_3 RF01948 9 1.76 116 217 0 0 hmm - 0.497 1870 KCNQ1OT1_5 RF01950 15 1.46 226 356 0 0 hmm - 0.380 1871 SOX2OT_exon1 RF01951 29 1.86 230 356 0 0 hmm - 0.380 1872 SOX2OT_exon2 RF01952 14 3.50 69 150 0 0 hmm - 0.815 1873 SOX2OT_exon3 RF01953 11 1.55 276 413 0 0 hmm - 0.379 1874 SOX2OT_exon4 RF01954 10 2.33 109 204 0 0 hmm - 0.527 1875 NEAT1_1 RF01955 17 2.09 122 223 0 0 hmm - 0.474 1876 NEAT1_2 RF01956 13 2.10 116 214 0 0 hmm - 0.498 1877 NEAT1_3 RF01957 18 1.46 159 275 0 0 hmm - 0.379 1878 SSU_rRNA_archaea RF01959 86 1.04 1477 1646 457 30 cm 0.590 0.302 1879 SSU_rRNA_eukarya RF01960 91 3.61 1851 2459 447 30 cm 0.590 0.418 1880 RMST_1 RF01962 14 4.64 61 136 0 0 hmm - 0.916 1881 RMST_2 RF01963 16 1.93 135 240 0 0 hmm - 0.430 1882 RMST_3 RF01964 16 1.87 109 208 0 0 hmm - 0.529 1883 RMST_4 RF01965 17 2.23 108 205 0 0 hmm - 0.532 1884 RMST_5 RF01966 21 1.86 128 232 0 0 hmm - 0.453 1885 RMST_6 RF01967 18 1.59 203 329 0 0 hmm - 0.380 1886 RMST_7 RF01968 22 1.72 268 405 0 0 hmm - 0.380 1887 RMST_8 RF01969 22 1.87 143 250 0 0 hmm - 0.408 1888 RMST_9 RF01970 28 1.47 193 315 0 0 hmm - 0.379 1889 RMST_10 RF01971 21 1.66 154 265 0 0 hmm - 0.380 1890 H19_1 RF01972 35 2.88 71 154 0 0 hmm - 0.794 1891 H19_2 RF01973 23 2.92 69 151 0 0 hmm - 0.815 1892 H19_3 RF01974 5 1.58 116 220 0 0 hmm - 0.497 1893 HOTAIRM1_1 RF01975 14 1.66 125 230 0 0 hmm - 0.464 1894 HOTAIRM1_2 RF01976 7 1.40 220 350 0 0 hmm - 0.381 1895 HOTAIRM1_3 RF01977 11 3.95 59 135 0 0 hmm - 0.946 1896 HOTAIRM1_4 RF01978 10 2.12 102 198 0 0 hmm - 0.563 1897 HOTAIRM1_5 RF01979 10 1.50 145 256 0 0 hmm - 0.403 1898 PCGEM1 RF01981 26 1.93 132 236 0 0 hmm - 0.441 1899 PYLIS_1 RF01982 20 2.16 100 116 15 0 cm 0.590 0.485 1900 Pinc RF01983 16 1.67 154 265 0 0 hmm - 0.381 1901 ZEB2_AS1_1 RF01984 11 1.64 128 282 0 0 hmm - 0.453 1902 ZEB2_AS1_2 RF01985 11 3.57 61 139 0 0 hmm - 0.916 1903 ZEB2_AS1_3 RF01986 11 1.92 100 201 0 0 hmm - 0.574 1904 ZEB2_AS1_4 RF01987 13 2.50 78 166 0 0 hmm - 0.726 1905 SECIS_2 RF01988 4 2.19 55 71 20 0 cm 1.010 0.773 1906 SECIS_3 RF01989 24 2.89 59 74 16 0 cm 0.946 0.759 1907 SECIS_4 RF01990 24 7.23 38 52 8 0 cm 1.435 1.381 1908 SECIS_5 RF01991 3 1.76 66 95 20 0 cm 0.850 0.609 1909 VIS1 RF01992 27 1.69 202 323 0 0 hmm - 0.380 1910 mir-995 RF01996 9 1.37 92 130 30 0 cm 0.620 0.352 1911 mir-969 RF01997 8 1.30 105 131 30 0 cm 0.590 0.341 1912 group-II-D1D4-1 RF01998 237 5.17 84 189 22 2 cm 0.676 0.487 1913 group-II-D1D4-2 RF01999 144 3.37 118 158 38 3 cm 0.590 0.316 1914 MIR1846 RF02000 21 1.62 86 104 32 0 cm 0.661 0.367 1915 group-II-D1D4-3 RF02001 406 5.94 171 317 48 1 cm 0.590 0.383 1916 mir-720 RF02002 35 1.66 110 127 26 0 cm 0.590 0.408 1917 group-II-D1D4-4 RF02003 90 7.93 138 365 27 3 cm 0.590 0.413 1918 group-II-D1D4-5 RF02004 139 4.83 200 343 54 3 cm 0.590 0.369 1919 group-II-D1D4-6 RF02005 174 9.15 228 371 58 3 cm 0.590 0.383 1920 mir-1253 RF02006 2 0.57 105 123 38 0 cm 0.591 0.233 1921 mir-1237 RF02007 3 0.48 102 120 38 0 cm 0.591 0.234 1922 mir-621 RF02008 3 0.64 96 114 33 0 cm 0.595 0.275 1923 mir-987 RF02009 3 0.74 105 123 31 0 cm 0.589 0.302 1924 mir-3180 RF02010 3 0.64 114 132 34 1 cm 0.591 0.309 1925 mir-575 RF02011 3 0.67 94 110 31 0 cm 0.607 0.291 1926 group-II-D1D4-7 RF02012 244 6.91 148 260 41 4 cm 0.590 0.357 1927 mir-1280 RF02013 3 0.59 94 112 33 0 cm 0.608 0.264 1928 mir-1178 RF02014 3 0.88 111 129 28 0 cm 0.590 0.368 1929 mir-1287 RF02015 3 0.78 90 108 32 0 cm 0.634 0.309 1930 mir-1183 RF02016 3 0.87 89 107 25 0 cm 0.639 0.385 1931 mir-1912 RF02017 13 1.23 80 97 26 0 cm 0.708 0.417 1932 mir-1207 RF02018 3 0.77 87 104 28 0 cm 0.653 0.361 1933 mir-1265 RF02019 3 0.79 86 102 35 0 cm 0.661 0.269 1934 mir-25 RF02020 3 0.88 84 102 27 0 cm 0.676 0.388 1935 mir-3179 RF02021 3 0.68 84 99 37 0 cm 0.677 0.246 1936 mir-1275 RF02022 6 1.19 80 190 24 0 cm 0.708 0.456 1937 mir-1208 RF02023 3 1.12 73 90 24 0 cm 0.773 0.478 1938 mir-1180 RF02024 3 1.45 69 84 27 0 cm 0.816 0.516 1939 mir-3017 RF02025 36 1.81 85 149 23 0 cm 0.668 0.449 1940 mir-2833 RF02026 5 1.31 75 92 23 0 cm 0.752 0.485 1941 MIR2907 RF02027 52 3.91 65 148 16 1 cm 0.863 0.708 1942 mir-1827 RF02028 6 1.76 67 83 21 0 cm 0.838 0.597 1943 sraA RF02029 20 2.08 95 113 20 1 cm 0.601 0.435 1944 tp2 RF02030 24 2.49 114 231 28 0 cm 0.590 0.404 1945 tpke11 RF02031 28 3.79 76 94 16 1 cm 0.744 0.625 1946 GOLLD RF02032 35 7.87 438 730 106 9 cm 0.590 0.372 1947 HEARO RF02033 110 3.17 132 420 35 3 cm 0.590 0.371 1948 IMES-1 RF02034 219 2.24 191 227 35 3 cm 0.590 0.429 1949 IMES-2 RF02035 366 1.65 141 161 39 3 cm 0.590 0.342 1950 IMES-3 RF02036 32 1.04 149 168 42 1 cm 0.591 0.328 1951 IMES-4 RF02037 30 1.37 80 97 27 2 cm 0.709 0.390 1952 SPRY4-IT1_1 RF02038 23 3.52 91 178 0 0 hmm - 0.627 1953 SPRY4-IT1_2 RF02039 24 3.71 121 212 0 0 hmm - 0.478 1954 HOTTIP_1 RF02040 7 3.93 57 133 0 0 hmm - 0.977 1955 HOTTIP_2 RF02041 25 1.79 374 551 0 0 hmm - 0.380 1956 HOTTIP_3 RF02042 23 1.98 353 501 0 0 hmm - 0.380 1957 HOTTIP_4 RF02043 19 1.80 166 279 0 0 hmm - 0.379 1958 CDKN2B-AS_2 RF02044 6 6.00 46 115 0 0 hmm - 1.088 1959 CDKN2B-AS_3 RF02045 18 3.12 144 243 0 0 hmm - 0.405 1960 Sphinx_1 RF02046 3 1.77 100 198 0 0 hmm - 0.574 1961 Sphinx_2 RF02047 37 1.90 158 321 0 0 hmm - 0.380 1962 STnc30 RF02048 2 0.83 132 151 33 3 cm 0.589 0.359 1963 STnc460 RF02049 2 0.94 146 164 47 3 cm 0.591 0.297 1964 STnc470 RF02050 2 1.08 223 246 43 4 cm 0.590 0.422 1965 STnc450 RF02051 12 3.59 57 73 16 1 cm 0.977 0.803 1966 STnc630 RF02052 10 1.61 166 185 31 3 cm 0.590 0.444 1967 STnc430 RF02053 7 2.00 162 181 33 2 cm 0.590 0.437 1968 STnc420 RF02054 3 1.80 58 76 13 0 cm 0.960 0.789 1969 STnc380 RF02055 5 1.14 108 126 28 1 cm 0.589 0.361 1970 STnc390 RF02056 2 1.69 60 75 15 1 cm 0.930 0.730 1971 STnc40 RF02057 17 4.01 70 92 16 1 cm 0.804 0.680 1972 STnc400 RF02058 2 0.87 124 141 43 1 cm 0.589 0.266 1973 STnc50 RF02059 2 1.26 84 101 12 1 cm 0.675 0.551 1974 STnc410 RF02060 14 2.79 158 176 17 2 cm 0.590 0.517 1975 mir-301 RF02061 17 1.68 84 101 24 0 cm 0.677 0.444 1976 STnc361 RF02062 2 0.99 150 169 35 2 cm 0.591 0.376 1977 STnc350 RF02063 2 1.66 68 85 13 1 cm 0.826 0.672 1978 STnc370 RF02064 10 2.79 71 88 16 1 cm 0.793 0.640 1979 STnc340 RF02065 4 1.49 130 148 15 1 cm 0.589 0.495 1980 STnc320 RF02066 3 2.05 55 70 12 0 cm 1.010 0.853 1981 STnc310 RF02067 8 2.16 61 77 12 1 cm 0.917 0.764 1982 STnc480 RF02068 6 2.03 72 108 8 0 cm 0.783 0.702 1983 STnc70 RF02069 2 0.86 149 167 37 2 cm 0.591 0.362 1984 STnc300 RF02070 4 1.19 159 178 33 3 cm 0.591 0.410 1985 STnc280 RF02071 3 1.42 83 101 11 1 cm 0.683 0.575 1986 STnc590 RF02072 3 0.97 160 179 24 2 cm 0.589 0.448 1987 STnc260 RF02073 2 0.93 176 195 36 2 cm 0.589 0.394 1988 STnc240 RF02074 15 2.72 77 95 11 1 cm 0.734 0.645 1989 STnc230 RF02075 11 3.14 83 102 12 0 cm 0.684 0.601 1990 STnc100 RF02076 24 3.48 206 255 47 5 cm 0.590 0.435 1991 STnc220 RF02077 4 1.36 81 98 11 1 cm 0.700 0.588 1992 STnc210 RF02078 2 1.09 177 197 24 2 cm 0.589 0.467 1993 STnc180 RF02079 10 2.64 217 258 39 3 cm 0.590 0.469 1994 STnc170 RF02080 3 0.87 333 355 77 8 cm 0.590 0.373 1995 STnc550 RF02081 11 1.66 388 423 53 6 cm 0.589 0.480 1996 STnc540 RF02082 3 1.00 202 220 47 2 cm 0.591 0.378 1997 OrzO-P RF02083 7 1.77 76 92 17 1 cm 0.744 0.569 1998 STnc130 RF02084 13 2.74 135 156 10 1 cm 0.590 0.541 1999 Yar_1 RF02085 10 3.81 74 164 0 0 hmm - 0.762 2000 Yar_2 RF02086 7 2.65 74 160 0 0 hmm - 0.763 2001 Yar_3 RF02087 4 2.75 67 150 0 0 hmm - 0.838 2002 STnc510 RF02088 5 1.03 807 880 230 12 cm 0.591 0.334 2003 CLRN1-AS1 RF02089 19 5.36 79 157 0 0 hmm - 0.716 2004 DAOA-AS1_1 RF02090 24 2.45 201 320 0 0 hmm - 0.380 2005 DAOA-AS1_2 RF02091 24 3.03 205 315 0 0 hmm - 0.380 2006 mir-2970 RF02092 5 1.01 88 105 30 0 cm 0.646 0.345 2007 mir-2968 RF02093 12 0.88 106 123 39 0 cm 0.589 0.273 2008 mir-1803 RF02094 6 1.95 85 103 32 0 cm 0.669 0.379 2009 mir-2985-2 RF02095 20 1.44 81 100 32 0 cm 0.700 0.370 2010 mir-2973 RF02096 7 1.37 78 93 32 0 cm 0.725 0.359 2011 mir-1662 RF02097 2 1.45 69 85 22 0 cm 0.816 0.557 2012 DGCR5 RF02098 4 4.00 49 123 0 0 hmm - 1.089 2013 rivX RF02099 2 0.83 248 269 66 4 cm 0.591 0.343 2014 tfoR RF02100 10 0.91 101 121 30 3 cm 0.590 0.316 2015 HULC RF02101 19 3.11 241 355 0 0 hmm - 0.380 2016 DISC2 RF02102 5 1.38 205 333 0 0 hmm - 0.381 2017 DLEU1_1 RF02103 26 3.02 190 298 0 0 hmm - 0.380 2018 DLEU1_2 RF02104 16 2.22 344 484 0 0 hmm - 0.380 2019 DLEU2_1 RF02105 27 2.96 121 214 0 0 hmm - 0.478 2020 DLEU2_2 RF02106 18 3.65 90 175 0 0 hmm - 0.633 2021 DLEU2_3 RF02107 24 4.15 76 156 0 0 hmm - 0.744 2022 DLEU2_4 RF02108 21 6.49 58 129 0 0 hmm - 0.961 2023 DLEU2_5 RF02109 30 3.82 84 167 0 0 hmm - 0.676 2024 DLEU2_6 RF02110 32 3.32 135 233 0 0 hmm - 0.431 2025 IS009 RF02111 11 1.75 198 219 23 2 cm 0.590 0.501 2026 DLG2-AS1_1 RF02112 21 1.92 215 336 0 0 hmm - 0.380 2027 DLG2-AS1_2 RF02113 23 2.33 215 395 0 0 hmm - 0.380 2028 FAM13A-AS1_1 RF02114 10 3.18 118 211 0 0 hmm - 0.489 2029 FAM13A-AS1_2 RF02115 10 3.07 114 208 0 0 hmm - 0.506 2030 FAS-AS1 RF02116 19 3.06 171 275 0 0 hmm - 0.380 2031 FMR1-AS1_1 RF02117 20 4.69 56 130 0 0 hmm - 0.994 2032 FMR1-AS1_2 RF02118 25 2.12 127 232 0 0 hmm - 0.456 2033 FTX_1 RF02119 11 3.89 71 151 0 0 hmm - 0.793 2034 FTX_2 RF02120 18 3.81 97 182 0 0 hmm - 0.590 2035 FTX_3 RF02121 14 2.25 147 260 0 0 hmm - 0.397 2036 FTX_5 RF02122 14 2.10 208 329 0 0 hmm - 0.380 2037 FTX_4 RF02123 13 2.00 141 251 0 0 hmm - 0.413 2038 JPX_1 RF02124 14 2.53 135 236 0 0 hmm - 0.431 2039 JPX_2 RF02125 11 4.92 69 146 0 0 hmm - 0.815 2040 GHRLOS RF02126 16 3.45 70 151 0 0 hmm - 0.805 2041 GNAS-AS1_1 RF02127 21 2.58 105 240 0 0 hmm - 0.547 2042 GNAS-AS1_2 RF02128 16 3.37 119 216 0 0 hmm - 0.486 2043 GNAS-AS1_3 RF02129 9 9.00 38 102 0 0 hmm - 1.310 2044 GNAS-AS1_4 RF02130 18 2.46 122 220 0 0 hmm - 0.475 2045 GNAS-AS1_5 RF02131 22 2.14 124 226 0 0 hmm - 0.467 2046 HOXB13-AS1_1 RF02132 12 2.48 136 301 0 0 hmm - 0.428 2047 HOXB13-AS1_2 RF02133 14 4.55 81 161 0 0 hmm - 0.700 2048 HTT-AS1_1 RF02134 3 1.15 230 366 0 0 hmm - 0.380 2049 HTT-AS1_2 RF02135 3 1.29 175 303 0 0 hmm - 0.379 2050 HTT-AS1_3 RF02136 4 3.71 60 138 0 0 hmm - 0.931 2051 HOXA11-AS1_1 RF02137 15 2.23 96 189 0 0 hmm - 0.595 2052 HOXA11-AS1_2 RF02138 21 1.84 187 304 0 0 hmm - 0.380 2053 HOXA11-AS1_3 RF02139 24 2.77 98 189 0 0 hmm - 0.584 2054 HOXA11-AS1_4 RF02140 20 1.63 233 361 0 0 hmm - 0.379 2055 HOXA11-AS1_5 RF02141 28 2.11 203 445 0 0 hmm - 0.380 2056 HOXA11-AS1_6 RF02142 21 1.51 179 368 0 0 hmm - 0.380 2057 HYMAI RF02143 16 2.14 242 394 0 0 hmm - 0.380 2058 rsmX RF02144 16 1.05 114 144 36 4 cm 0.590 0.303 2059 MEG8_1 RF02145 23 3.42 97 186 0 0 hmm - 0.590 2060 MEG8_2 RF02146 12 2.63 111 218 0 0 hmm - 0.519 2061 MEG8_3 RF02147 10 4.56 66 143 0 0 hmm - 0.851 2062 MESTIT1_1 RF02148 16 2.64 144 296 0 0 hmm - 0.405 2063 MESTIT1_2 RF02149 16 1.66 235 371 0 0 hmm - 0.380 2064 MESTIT1_3 RF02150 18 3.23 99 212 0 0 hmm - 0.579 2065 MIMT1_1 RF02151 21 4.89 88 195 0 0 hmm - 0.647 2066 NBR2 RF02153 26 3.17 63 143 0 0 hmm - 0.888 2067 NCRUPAR_1 RF02154 9 1.79 140 247 0 0 hmm - 0.416 2068 NCRUPAR_2 RF02155 3 1.66 99 197 0 0 hmm - 0.578 2069 NPPA-AS1_1 RF02156 19 2.19 176 288 0 0 hmm - 0.379 2070 NPPA-AS1_2 RF02157 16 2.29 150 257 0 0 hmm - 0.390 2071 NPPA-AS1_3 RF02158 24 3.59 108 197 0 0 hmm - 0.532 2072 PART1_1 RF02159 22 2.11 218 410 0 0 hmm - 0.380 2073 PART1_2 RF02160 29 2.11 249 509 0 0 hmm - 0.380 2074 PART1_3 RF02161 3 1.51 131 350 0 0 hmm - 0.444 2075 XIST_A_REPEAT RF02162 54 51.88 37 56 7 1 cm 1.472 1.449 2076 sR-tMet RF02163 2 1.71 72 88 17 0 cm 0.783 0.620 2077 PVT1_1 RF02164 17 2.12 178 291 0 0 hmm - 0.379 2078 PVT1_2 RF02165 17 2.37 173 338 0 0 hmm - 0.380 2079 PVT1_3 RF02166 25 5.91 95 174 0 0 hmm - 0.602 2080 PVT1_4 RF02167 10 2.17 173 292 0 0 hmm - 0.380 2081 PVT1_5 RF02168 23 3.66 133 226 0 0 hmm - 0.437 2082 PVT1_6 RF02169 7 2.64 113 208 0 0 hmm - 0.510 2083 PVT1_7 RF02170 8 2.65 137 238 0 0 hmm - 0.425 2084 RFPL3-AS1_1 RF02171 4 2.00 88 181 0 0 hmm - 0.647 2085 RFPL3-AS1_2 RF02172 3 2.82 71 155 0 0 hmm - 0.793 2086 SMAD5-AS1_1 RF02173 18 2.50 263 389 0 0 hmm - 0.380 2087 SMAD5-AS1_2 RF02174 20 2.86 129 226 0 0 hmm - 0.450 2088 SMAD5-AS1_3 RF02175 18 2.33 125 225 0 0 hmm - 0.464 2089 SMAD5-AS1_4 RF02176 19 1.77 173 288 0 0 hmm - 0.380 2090 SMCR2_1 RF02177 6 1.95 159 301 0 0 hmm - 0.380 2091 SMCR2_2 RF02178 5 1.81 165 279 0 0 hmm - 0.379 2092 ST7-AS1_1 RF02179 25 3.07 117 254 0 0 hmm - 0.494 2093 ST7-AS1_2 RF02180 24 3.07 110 202 0 0 hmm - 0.524 2094 ST7-AS2_1 RF02181 4 2.56 72 157 0 0 hmm - 0.783 2095 ST7-AS2_2 RF02182 8 7.10 47 115 0 0 hmm - 1.173 2096 ST7-OT3_1 RF02183 28 4.00 79 160 0 0 hmm - 0.717 2097 ST7-OT3_2 RF02184 5 1.33 138 250 0 0 hmm - 0.422 2098 ST7-OT3_3 RF02185 21 3.65 116 208 0 0 hmm - 0.498 2099 ST7-OT3_4 RF02186 8 2.61 73 158 0 0 hmm - 0.772 2100 ST7-OT4_1 RF02187 24 2.49 201 321 0 0 hmm - 0.380 2101 ST7-OT4_2 RF02188 29 2.98 172 277 0 0 hmm - 0.380 2102 ST7-OT4_3 RF02189 20 2.22 302 506 0 0 hmm - 0.379 2103 ST7-OT4_4 RF02190 26 2.35 211 356 0 0 hmm - 0.380 2104 TCL6_1 RF02191 9 2.18 113 211 0 0 hmm - 0.511 2105 TCL6_2 RF02192 12 2.98 126 222 0 0 hmm - 0.460 2106 TCL6_3 RF02193 26 2.82 139 244 0 0 hmm - 0.419 2107 HPnc0260 RF02194 31 6.38 156 194 22 2 cm 0.590 0.502 2108 TP53TG1_1 RF02195 16 2.57 153 257 0 0 hmm - 0.383 2109 TP53TG1_2 RF02196 12 2.67 186 317 0 0 hmm - 0.380 2110 TP73-AS1 RF02197 4 1.62 161 276 0 0 hmm - 0.380 2111 TTC28-AS1_1 RF02198 14 2.72 162 267 0 0 hmm - 0.380 2112 TTC28-AS1_2 RF02199 8 2.04 156 264 0 0 hmm - 0.379 2113 TTC28-AS1_3 RF02200 6 1.88 184 301 0 0 hmm - 0.380 2114 TTC28-AS1_4 RF02201 18 3.07 113 206 0 0 hmm - 0.511 2115 UCA1 RF02202 5 2.18 75 163 0 0 hmm - 0.752 2116 WT1-AS_1 RF02203 10 1.95 109 207 0 0 hmm - 0.527 2117 WT1-AS_2 RF02204 18 2.61 137 238 0 0 hmm - 0.425 2118 WT1-AS_3 RF02205 19 2.29 245 367 0 0 hmm - 0.379 2119 WT1-AS_4 RF02206 12 2.67 134 233 0 0 hmm - 0.434 2120 WT1-AS_5 RF02207 4 1.94 79 171 0 0 hmm - 0.716 2121 WT1-AS_6 RF02208 19 2.30 121 220 0 0 hmm - 0.478 2122 WT1-AS_7 RF02209 21 1.74 294 433 0 0 hmm - 0.380 2123 WT1-AS_8 RF02210 24 2.18 281 531 0 0 hmm - 0.380 2124 ZFAT-AS1_1 RF02211 3 1.96 79 169 0 0 hmm - 0.718 2125 ZFAT-AS1_2 RF02212 11 2.36 205 509 0 0 hmm - 0.380 2126 ZFAT-AS1_3 RF02213 5 2.48 80 168 0 0 hmm - 0.708 2127 mir-56 RF02214 4 2.30 97 190 0 0 hmm - 0.590 2128 ZNFX1-AS1_1 RF02215 15 2.34 198 317 0 0 hmm - 0.380 2129 ZNFX1-AS1_2 RF02216 18 5.73 93 173 0 0 hmm - 0.614 2130 ZNFX1-AS1_3 RF02217 3 1.92 87 180 0 0 hmm - 0.653 2131 ZNRD1-AS1_1 RF02218 8 3.47 68 148 0 0 hmm - 0.826 2132 ZNRD1-AS1_2 RF02219 34 4.54 76 155 0 0 hmm - 0.744 2133 ZNRD1-AS1_3 RF02220 9 1.85 104 202 0 0 hmm - 0.553 2134 sRNA-Xcc1 RF02221 74 4.45 87 120 20 1 cm 0.654 0.440 2135 sX2 RF02222 9 0.91 110 141 31 2 cm 0.591 0.340 2136 sX4 RF02223 5 1.02 167 189 42 3 cm 0.591 0.372 2137 sX5 RF02224 10 2.76 49 65 10 0 cm 1.128 1.010 2138 sX6 RF02225 8 1.14 342 364 68 7 cm 0.591 0.423 2139 sX7 RF02226 8 0.74 95 113 26 2 cm 0.602 0.350 2140 sX8 RF02227 12 1.87 82 98 25 1 cm 0.692 0.470 2141 sX9 RF02228 16 3.53 76 92 17 2 cm 0.744 0.613 2142 sX11 RF02230 10 0.93 138 167 43 3 cm 0.590 0.306 2143 sX12 RF02231 8 1.11 78 95 21 1 cm 0.727 0.500 2144 sX13 RF02232 12 0.84 115 134 37 3 cm 0.590 0.290 2145 sX14 RF02233 8 0.86 92 110 27 3 cm 0.621 0.353 2146 sX15 RF02234 14 1.01 159 190 48 1 cm 0.591 0.317 2147 asX1 RF02235 15 0.85 115 133 38 2 cm 0.589 0.294 2148 asX2 RF02236 2 1.11 87 105 18 1 cm 0.655 0.483 2149 asX3 RF02237 4 0.87 182 201 50 3 cm 0.590 0.344 2150 asX4 RF02238 8 0.93 309 339 87 6 cm 0.591 0.344 2151 asX6 RF02239 3 0.74 93 111 31 1 cm 0.614 0.306 2152 Xoo1 RF02240 5 1.04 95 119 24 3 cm 0.603 0.377 2153 Xoo2 RF02241 3 1.06 78 96 20 2 cm 0.725 0.505 2154 Xoo5 RF02242 3 1.03 124 155 30 1 cm 0.591 0.387 2155 Xoo8 RF02243 4 0.94 323 353 81 8 cm 0.589 0.363 2156 mir-785 RF02244 4 1.32 95 122 31 0 cm 0.601 0.311 2157 mir-788 RF02245 4 1.57 79 99 28 0 cm 0.716 0.404 2158 Six3os1_1 RF02246 9 2.89 87 174 0 0 hmm - 0.654 2159 Six3os1_2 RF02247 15 1.40 217 350 0 0 hmm - 0.380 2160 Six3os1_3 RF02248 10 3.09 75 159 0 0 hmm - 0.754 2161 Six3os1_4 RF02249 7 1.52 326 477 0 0 hmm - 0.379 2162 Six3os1_5 RF02250 15 1.61 272 409 0 0 hmm - 0.380 2163 Six3os1_6 RF02251 4 1.43 200 324 0 0 hmm - 0.379 2164 Six3os1_7 RF02252 5 1.40 194 340 0 0 hmm - 0.379 2165 IRE_II RF02253 29 29.00 31 43 13 0 cm 1.140 0.771 2166 mir-35 RF02254 2 0.60 97 113 40 0 cm 0.590 0.196 2167 adapt33_1 RF02255 3 2.82 76 161 0 0 hmm - 0.744 2168 adapt33_2 RF02256 2 2.00 71 158 0 0 hmm - 0.606 2169 adapt33_3 RF02257 3 1.65 140 249 0 0 hmm - 0.416 2170 adapt33_4 RF02258 2 1.34 179 300 0 0 hmm - 0.380 2171 Vax2os1_1 RF02259 3 1.25 187 336 0 0 hmm - 0.381 2172 MAT2A_A RF02260 20 2.10 65 81 19 0 cm 0.863 0.653 2173 MAT2A_B RF02261 28 1.92 64 79 21 0 cm 0.876 0.630 2174 MAT2A_C RF02262 18 2.82 52 66 18 0 cm 1.067 0.833 2175 MAT2A_D RF02263 35 35.00 41 53 13 0 cm 1.294 1.194 2176 MAT2A_E RF02264 28 2.16 67 82 24 0 cm 0.838 0.578 2177 MAT2A_F RF02265 26 1.63 66 82 23 0 cm 0.850 0.580 2178 XIST_intron RF02266 20 1.68 68 85 18 0 cm 0.828 0.601 2179 Vax2os1_2 RF02267 3 1.18 466 645 0 0 hmm - 0.380 2180 MtlS RF02268 6 1.16 121 145 38 1 cm 0.590 0.302 2181 HPnc0580 RF02269 7 1.23 105 125 20 2 cm 0.590 0.427 2182 nse_sRNA RF02270 7 1.51 73 99 19 1 cm 0.772 0.549 2183 uc_338 RF02271 34 1.81 180 202 50 1 cm 0.590 0.370 2184 Vax2os1_3 RF02272 5 1.66 199 322 0 0 hmm - 0.380 2185 FsrA RF02273 6 1.15 83 100 20 1 cm 0.685 0.465 2186 AniS RF02274 5 0.96 106 125 22 1 cm 0.591 0.400 2187 Hammerhead_HH9 RF02275 33 1.57 77 103 18 1 cm 0.734 0.544 2188 Hammerhead_II RF02276 24 6.69 67 124 17 1 cm 0.838 0.664 2189 Hammerhead_HH10 RF02277 18 0.96 125 144 34 1 cm 0.589 0.337 2190 Betaproteobacteria_toxic_sRNA RF02278 51 4.14 64 86 16 1 cm 0.875 0.670 2191 TtnuCD1 RF02279 2 2.00 63 148 0 0 hmm - 0.699 2192 TtnuCD3 RF02280 3 2.32 72 158 0 0 hmm - 0.782 2193 TtnuCD4 RF02281 3 3.00 60 139 0 0 hmm - 0.845 2194 TtnuCD5 RF02282 2 2.00 77 166 0 0 hmm - 0.709 2195 TtnuCD6 RF02283 2 2.00 72 160 0 0 hmm - 0.607 2196 TtnuCD7 RF02284 2 1.55 108 209 0 0 hmm - 0.531 2197 TtnuCD8 RF02285 2 2.00 59 142 0 0 hmm - 0.656 2198 TtnuCD9 RF02286 2 2.00 55 137 0 0 hmm - 0.713 2199 TtnuCD10 RF02287 4 1.84 117 219 0 0 hmm - 0.494 2200 TtnuCD11 RF02288 3 2.86 74 158 0 0 hmm - 0.762 2201 TtnuCD13 RF02289 2 2.00 63 148 0 0 hmm - 0.726 2202 TtnuCD14 RF02290 2 2.00 74 162 0 0 hmm - 0.684 2203 TtnuCD15 RF02291 2 2.00 65 150 0 0 hmm - 0.637 2204 TtnuCD16 RF02292 2 2.00 58 141 0 0 hmm - 0.717 2205 TtnuCD17 RF02293 2 2.00 68 154 0 0 hmm - 0.716 2206 TtnuCD18 RF02294 2 2.00 58 141 0 0 hmm - 0.647 2207 TtnuCD19 RF02295 2 2.00 70 157 0 0 hmm - 0.623 2208 TtnuCD20 RF02296 2 2.00 66 152 0 0 hmm - 0.730 2209 TtnuCD21 RF02297 2 2.00 65 150 0 0 hmm - 0.619 2210 TtnuCD22 RF02298 2 2.00 77 166 0 0 hmm - 0.729 2211 TtnuCD23 RF02299 2 2.00 72 160 0 0 hmm - 0.707 2212 TtnuCD24 RF02300 2 2.00 58 141 0 0 hmm - 0.726 2213 TtnuCD25 RF02301 3 2.15 89 181 0 0 hmm - 0.640 2214 TtnuCD26 RF02302 2 1.69 108 208 0 0 hmm - 0.533 2215 TtnuCD28 RF02303 2 2.00 64 149 0 0 hmm - 0.701 2216 TtnuCD29 RF02304 2 2.00 78 168 0 0 hmm - 0.724 2217 TtnuCD31 RF02305 2 2.00 67 153 0 0 hmm - 0.710 2218 TtnuCD32 RF02306 3 1.68 98 196 0 0 hmm - 0.584 2219 TtnuCD33 RF02307 2 2.00 74 163 0 0 hmm - 0.696 2220 TtnuCD34 RF02308 2 2.00 64 149 0 0 hmm - 0.694 2221 TtnuHACA1 RF02309 2 0.76 113 132 37 1 cm 0.590 0.272 2222 TtnuHACA2 RF02310 3 0.92 121 139 34 1 cm 0.591 0.326 2223 TtnuHACA3 RF02311 2 0.89 152 171 38 2 cm 0.589 0.357 2224 TtnuHACA5 RF02312 2 0.71 132 150 44 1 cm 0.591 0.265 2225 TtnuHACA6 RF02313 2 0.86 131 149 36 3 cm 0.589 0.330 2226 TtnuHACA7 RF02314 2 1.05 129 147 32 1 cm 0.590 0.376 2227 TtnuHACA8 RF02315 3 0.89 130 149 38 2 cm 0.590 0.324 2228 TtnuHACA9 RF02316 3 1.02 135 156 37 1 cm 0.590 0.336 2229 TtnuHACA10 RF02317 3 1.02 104 122 23 1 cm 0.590 0.381 2230 TtnuHACA11a RF02318 2 0.88 141 159 36 1 cm 0.589 0.347 2231 TtnuHACA12 RF02319 2 0.95 131 149 40 1 cm 0.589 0.294 2232 TtnuHACA13 RF02320 2 0.81 134 153 37 2 cm 0.590 0.328 2233 TtnuHACA14 RF02321 3 0.86 133 152 36 1 cm 0.590 0.339 2234 TtnuHACA15 RF02322 2 0.83 117 135 32 1 cm 0.590 0.329 2235 TtnuHACA16 RF02323 2 0.82 117 135 30 1 cm 0.591 0.342 2236 TtnuHACA17 RF02324 3 1.06 118 136 27 1 cm 0.589 0.378 2237 TtnuHACA18 RF02325 3 1.05 130 148 34 1 cm 0.590 0.348 2238 TtnuHACA19 RF02326 2 0.89 121 139 27 2 cm 0.590 0.382 2239 TtnuHACA20 RF02327 2 0.76 123 141 38 2 cm 0.590 0.295 2240 TtnuHACA21 RF02328 2 0.81 130 148 34 1 cm 0.589 0.342 2241 TtnuHACA22 RF02329 2 0.83 103 121 30 1 cm 0.589 0.321 2242 TtnuHACA23 RF02330 2 1.04 135 153 37 1 cm 0.590 0.330 2243 TtnuHACA24 RF02331 2 0.82 127 145 37 1 cm 0.590 0.318 2244 TtnuHACA25 RF02332 2 0.77 111 129 32 2 cm 0.591 0.309 2245 TtnuHACA27 RF02333 2 1.11 86 103 17 0 cm 0.660 0.468 2246 TtnuHACA28 RF02334 2 0.81 134 153 33 1 cm 0.590 0.357 2247 GlsR2_miR4 RF02335 3 0.73 106 124 32 1 cm 0.589 0.301 2248 GlsR1_miR6 RF02336 2 1.21 85 102 19 0 cm 0.669 0.496 2249 GlsR8_miR10 RF02337 3 1.32 70 86 20 0 cm 0.805 0.567 2250 GlsR16_miR3 RF02338 3 1.19 77 93 20 0 cm 0.735 0.519 2251 GlsR17_miR2 RF02339 4 1.00 145 166 21 0 cm 0.591 0.465 2252 DENV_SLA RF02340 4 1.45 71 88 22 1 cm 0.794 0.522 2253 ncrMT1302 RF02341 7 1.32 109 127 20 2 cm 0.591 0.440 2254 ar7 RF02342 29 2.01 146 174 34 2 cm 0.590 0.379 2255 ar9 RF02343 28 1.29 149 178 40 4 cm 0.591 0.355 2256 ar14 RF02344 118 2.75 123 148 31 2 cm 0.590 0.350 2257 ar15 RF02345 61 2.01 113 151 29 2 cm 0.590 0.360 2258 ar35 RF02346 13 1.38 144 163 45 2 cm 0.590 0.327 2259 ar45 RF02347 36 1.10 148 195 44 2 cm 0.590 0.313 2260 tracrRNA RF02348 35 2.06 91 113 7 0 cm 0.627 0.565 2261 psRNA2 RF02349 7 1.75 201 267 55 4 cm 0.590 0.359 2262 psRNA6 RF02350 2 0.99 324 347 103 5 cm 0.590 0.301 2263 psRNA14 RF02351 3 1.50 84 99 35 1 cm 0.677 0.294 2264 BjrC68 RF02353 12 1.68 82 99 19 1 cm 0.692 0.509 2265 BjrC80 RF02354 15 1.53 162 184 48 3 cm 0.590 0.331 2266 BjrC174 RF02355 15 2.05 201 226 43 2 cm 0.590 0.432 2267 BjrC1505 RF02356 25 1.71 140 167 39 5 cm 0.590 0.379 2268 RNaseP-T RF02357 9 1.09 208 230 53 3 cm 0.589 0.354 2269 hsp17 RF02358 3 3.00 49 64 12 0 cm 0.826 0.688 2270 MS2 RF02359 5 5.00 36 50 7 0 cm 1.340 1.270 2271 Yfr8 RF02360 5 0.93 226 246 63 3 cm 0.590 0.340 2272 Yfr10 RF02362 6 2.62 78 95 17 1 cm 0.726 0.559 2273 Yfr11 RF02363 4 1.43 144 175 41 2 cm 0.589 0.337 2274 Yfr13 RF02364 7 1.06 98 117 25 3 cm 0.590 0.358 2275 Yfr17 RF02365 3 1.02 264 285 74 2 cm 0.589 0.339 2276 Yfr19 RF02366 6 1.30 82 103 27 1 cm 0.692 0.396 2277 Yfr20 RF02367 7 1.47 89 113 25 2 cm 0.640 0.403 2278 Yfr21 RF02368 2 1.00 205 224 43 3 cm 0.589 0.400 2279 h2cR RF02369 7 0.81 137 156 51 0 cm 0.589 0.264 2280 Trp_leader_2 RF02370 9 1.48 147 194 27 1 cm 0.590 0.439 2281 PyrG_leader RF02371 10 2.64 78 103 12 0 cm 0.725 0.610 2282 PyrC_leader RF02372 9 4.32 50 71 5 0 cm 1.106 1.067 2283 PyrD_leader RF02373 27 2.48 74 90 6 0 cm 0.763 0.704 2284 YenS RF02374 7 1.15 169 188 54 4 cm 0.591 0.320 2285 Aar RF02375 13 1.76 191 248 49 3 cm 0.590 0.392 2286 SR1 RF02376 6 1.47 210 255 45 2 cm 0.591 0.410 2287 SurA RF02377 4 0.85 278 319 71 4 cm 0.589 0.356 2288 SurC RF02378 4 0.83 161 179 54 2 cm 0.590 0.270 2289 csRNA RF02379 48 1.68 93 119 20 1 cm 0.614 0.413 2290 FasX RF02384 8 1.29 207 231 68 2 cm 0.590 0.295 2291 sau-13 RF02385 6 1.38 104 122 25 2 cm 0.591 0.394 2292 sau-19 RF02386 4 1.26 75 91 27 0 cm 0.754 0.426 2293 sau-27 RF02387 3 1.07 92 112 27 1 cm 0.621 0.365 2294 sau-30 RF02388 2 1.98 64 79 12 0 cm 0.876 0.750 2295 sau-31 RF02389 3 1.65 66 82 11 0 cm 0.851 0.726 2296 sau-41 RF02390 2 0.86 156 176 35 2 cm 0.590 0.381 2297 sau-50 RF02391 117 4.11 148 190 37 1 cm 0.590 0.433 2298 sau-53 RF02392 4 0.94 192 211 56 3 cm 0.590 0.324 2299 sau-59 RF02393 3 1.15 128 147 27 2 cm 0.589 0.406 2300 sau-63 RF02394 3 0.77 98 116 26 3 cm 0.590 0.335 2301 sau-66 RF02395 3 1.18 80 97 20 1 cm 0.708 0.484 2302 sau-5949 RF02396 7 2.65 59 74 15 0 cm 0.946 0.757 2303 sau-5971 RF02397 3 0.65 96 113 35 2 cm 0.595 0.243 2304 sau-6072 RF02398 2 2.00 53 68 17 1 cm 1.020 0.781 2305 NsiR1 RF02399 17 4.39 60 80 14 1 cm 0.931 0.779 2306 Hsp83_3_UTR RF02400 5 0.82 470 519 143 6 cm 0.589 0.314 2307 ClpQY_promoter RF02401 39 7.91 58 132 8 0 cm 0.961 0.840 2308 Afu_263 RF02402 19 1.68 96 114 14 1 cm 0.595 0.468 2309 Afu_328 RF02403 4 2.82 73 169 0 0 hmm - 0.772 2310 P33 RF02404 3 0.75 160 179 45 4 cm 0.590 0.328 2311 P34 RF02405 5 1.58 383 441 99 8 cm 0.590 0.371 2312 snoR120 RF02406 4 2.30 85 177 0 0 hmm - 0.668 2313 snoR122 RF02407 4 2.47 74 160 0 0 hmm - 0.762 2314 snoR124 RF02408 5 1.61 77 96 4 0 cm 0.734 0.691 2315 snoR125 RF02409 5 0.89 200 223 65 2 cm 0.590 0.294 2316 snoR136 RF02410 8 1.83 152 171 43 1 cm 0.590 0.353 2317 snoR138 RF02411 7 1.55 154 187 41 2 cm 0.590 0.357 2318 snoR144 RF02412 4 0.94 144 165 40 1 cm 0.589 0.333 2319 snoR145 RF02413 19 1.90 147 174 35 2 cm 0.590 0.403 2320 rli60 RF02414 11 2.29 191 305 43 1 cm 0.590 0.400 2321 rliG RF02415 5 1.72 267 321 56 5 cm 0.589 0.412 2322 TCV_H4 RF02416 2 2.00 51 66 9 0 cm 0.928 0.790 2323 VR-RNA RF02417 3 0.83 397 419 111 4 cm 0.590 0.313 2324 Spd-sr07 RF02418 3 1.57 63 79 16 0 cm 0.889 0.668 2325 Spd-sr37 RF02419 25 2.75 67 82 12 0 cm 0.838 0.713 2326 Bp1_162 RF02420 11 1.32 100 124 20 1 cm 0.591 0.427 2327 Bp1_684 RF02421 14 1.25 113 132 16 2 cm 0.590 0.473 2328 Bp1_738 RF02422 21 1.85 208 230 33 3 cm 0.590 0.469 2329 Bp1_781 RF02423 15 1.52 230 262 67 5 cm 0.590 0.363 2330 Bp2_287 RF02424 14 1.15 174 218 44 4 cm 0.591 0.373 2331 SpF01_sRNA RF02425 13 1.91 80 98 16 0 cm 0.709 0.556 2332 SpF03_sRNA RF02426 3 0.83 106 126 31 2 cm 0.589 0.317 2333 SpF10_sRNA RF02427 2 1.81 57 73 17 1 cm 0.976 0.745 2334 SpF11_sRNA RF02428 3 1.02 95 113 20 1 cm 0.602 0.410 2335 SpF14_sRNA RF02429 4 1.15 120 138 36 1 cm 0.591 0.331 2336 SpF19_sRNA RF02430 3 0.82 99 118 36 1 cm 0.590 0.230 2337 SpF22_sRNA RF02431 22 1.72 140 194 35 2 cm 0.590 0.403 2338 SpF25_sRNA RF02432 20 1.23 102 124 34 1 cm 0.591 0.297 2339 SpF36_sRNA RF02433 4 2.82 51 68 14 0 cm 1.086 0.915 2340 SpF39_sRNA RF02434 13 1.22 109 143 28 1 cm 0.590 0.364 2341 SpF41_sRNA RF02435 9 1.46 105 127 27 2 cm 0.589 0.358 2342 SpF43_sRNA RF02436 5 0.91 99 117 34 0 cm 0.589 0.268 2343 SpF44_sRNA RF02437 12 1.22 102 128 30 2 cm 0.590 0.330 2344 SpF51_sRNA RF02438 8 3.99 45 83 10 1 cm 1.222 1.118 2345 SpF56_sRNA RF02439 2 0.86 99 116 24 0 cm 0.590 0.375 2346 SpF59_sRNA RF02440 4 1.28 81 99 20 2 cm 0.699 0.492 2347 SpF61_sRNA RF02441 3 2.22 58 73 12 0 cm 0.962 0.838 2348 SpF66_sRNA RF02442 9 1.15 239 262 71 4 cm 0.591 0.327 2349 SpR08_sRNA RF02443 3 1.31 73 89 17 1 cm 0.773 0.577 2350 SpR10_sRNA RF02444 5 3.18 47 62 11 0 cm 1.174 1.045 2351 SpR14_sRNA RF02445 5 1.60 80 100 17 0 cm 0.708 0.523 2352 SpR18_sRNA RF02446 23 1.78 132 155 28 2 cm 0.590 0.422 2353 SpR19_sRNA RF02447 23 1.77 123 245 30 1 cm 0.590 0.411 2354 SpR20_sRNA RF02448 7 3.74 45 60 11 1 cm 1.223 1.114 2355 ncr1015 RF02449 16 2.07 121 149 23 1 cm 0.590 0.447 2356 ncr1175 RF02450 4 0.96 110 143 30 1 cm 0.589 0.340 2357 ncr1241 RF02451 8 3.12 63 93 15 1 cm 0.888 0.693 2358 ncr1575 RF02452 29 2.38 215 264 54 2 cm 0.590 0.392 2359 ncr952 RF02453 6 1.19 143 164 38 3 cm 0.590 0.363 2360 ncr982 RF02454 6 1.78 79 96 14 1 cm 0.717 0.583 2361 Virus_CITE_1 RF02455 2 0.84 93 110 27 2 cm 0.615 0.337 2362 Diantho_3_UTR RF02456 2 1.06 205 224 32 3 cm 0.591 0.453 2363 Virus_CITE_2 RF02457 9 1.08 167 186 59 1 cm 0.590 0.272 2364 Virus_CITE_3 RF02458 2 0.96 122 140 35 1 cm 0.589 0.318 2365 Virus_CITE_4 RF02459 5 1.45 85 103 24 1 cm 0.669 0.416 2366 Virus_CITE_5 RF02460 2 0.75 94 110 32 0 cm 0.608 0.291 2367 Virus_CITE_6 RF02461 3 0.93 115 133 34 3 cm 0.590 0.324 2368 Telomerase_Asco RF02462 4 1.79 1859 2025 89 6 cm 0.591 0.551 2369 Ms_AS-1 RF02463 5 1.27 98 116 21 2 cm 0.591 0.418 2370 Ms_AS-4 RF02464 9 1.81 82 99 22 1 cm 0.691 0.484 2371 Ms_AS-5 RF02465 9 5.02 45 59 7 0 cm 1.223 1.168 2372 Ms_AS-8 RF02466 10 2.17 74 93 15 1 cm 0.763 0.609 2373 Ms_IGR-2 RF02467 3 1.48 82 99 13 1 cm 0.692 0.577 2374 Ms_IGR-4 RF02468 2 2.00 38 53 10 0 cm 1.040 0.878 2375 Ms_IGR-7 RF02469 14 1.94 118 139 35 1 cm 0.590 0.361 2376 Ms_IGR-8 RF02470 3 2.92 63 78 15 0 cm 0.888 0.731 2377 Ms_IGR-5 RF02471 21 1.65 184 261 39 2 cm 0.590 0.426 2378 Gl_RNase_MRP RF02472 2 0.93 119 137 22 2 cm 0.590 0.425 2379 GlsR4 RF02473 2 2.00 61 145 0 0 hmm - 0.684 2380 GlsR5 RF02474 2 1.78 89 184 0 0 hmm - 0.640 2381 GlsR6 RF02475 3 2.96 59 139 0 0 hmm - 0.946 2382 GlsR7 RF02476 3 2.17 59 75 3 0 cm 0.946 0.913 2383 GlsR9 RF02477 2 1.44 79 97 4 0 cm 0.718 0.673 2384 GlsR10 RF02478 2 1.65 68 85 3 0 cm 0.825 0.791 2385 GlsR13 RF02479 3 1.70 100 198 0 0 hmm - 0.573 2386 GlsR14 RF02480 3 2.45 68 152 0 0 hmm - 0.826 2387 GlsR18 RF02481 3 1.00 147 166 30 1 cm 0.590 0.412 2388 GlsR19 RF02482 3 1.12 150 169 21 2 cm 0.590 0.465 2389 GlsR20 RF02483 3 0.83 107 125 29 1 cm 0.591 0.344 2390 GlsR21 RF02484 3 0.88 112 130 31 1 cm 0.590 0.336 2391 GlsR22 RF02485 3 0.91 150 168 40 2 cm 0.589 0.349 2392 GlsR23 RF02486 2 1.11 149 168 17 0 cm 0.590 0.492 2393 GlsR24 RF02487 3 0.94 147 177 35 2 cm 0.591 0.383 2394 GlsR25 RF02488 3 0.98 146 165 29 1 cm 0.591 0.419 2395 GlsR26 RF02489 3 0.95 114 131 26 1 cm 0.589 0.390 2396 GlsR27 RF02490 2 0.75 113 131 31 2 cm 0.591 0.330 2397 Gl_U1 RF02491 2 0.70 121 152 37 2 cm 0.589 0.303 2398 Gl_U2 RF02492 2 0.88 136 155 27 2 cm 0.591 0.417 2399 Gl_U4 RF02493 2 1.03 95 113 13 1 cm 0.601 0.483 2400 Gl_U6 RF02494 2 0.85 102 120 19 2 cm 0.588 0.418 2401 ohsC_RNA RF02495 34 1.68 77 93 24 1 cm 0.735 0.469 2402 Atu_At1 RF02496 33 1.93 108 130 28 2 cm 0.590 0.363 2403 Atu_C10 RF02497 2 0.84 89 106 25 1 cm 0.640 0.373 2404 Atu_C3 RF02498 2 0.67 156 175 53 3 cm 0.590 0.268 2405 Atu_C4 RF02499 2 1.21 70 86 21 1 cm 0.804 0.541 2406 Atu_C6 RF02500 32 2.01 113 147 25 1 cm 0.590 0.412 2407 Atu_C7 RF02501 3 1.05 157 177 26 1 cm 0.591 0.446 2408 Atu_C8 RF02502 27 2.11 122 155 32 3 cm 0.590 0.393 2409 Atu_C9 RF02503 9 2.03 192 229 21 1 cm 0.590 0.509 2410 Atu_L1 RF02504 4 0.92 174 194 34 3 cm 0.589 0.415 2411 Atu_L6 RF02505 3 0.93 124 142 36 2 cm 0.591 0.330 2412 Atu_Ti1 RF02506 14 1.64 92 110 27 2 cm 0.620 0.384 2413 Atu_Ti3 RF02507 4 1.60 89 107 7 0 cm 0.640 0.579 2414 Atu_Ti4 RF02508 3 1.06 107 124 20 0 cm 0.590 0.436 2415 PYLIS_2 RF02509 23 1.81 100 117 18 1 cm 0.590 0.461 2416 PYLIS_3 RF02510 23 3.73 100 117 8 3 cm 0.590 0.540 2417 PYLIS_4 RF02511 2 1.10 100 117 13 1 cm 0.590 0.473 2418 PYLIS_5 RF02512 17 0.93 100 118 22 1 cm 0.590 0.380 2419 PYLIS_6 RF02513 3 0.95 100 118 11 0 cm 0.589 0.491 2420 5_ureB_sRNA RF02514 13 1.46 292 315 90 4 cm 0.590 0.348 2421 AfaR RF02515 2 0.87 234 254 51 2 cm 0.591 0.380 2422 mir-393 RF02516 27 3.06 129 183 29 0 cm 0.590 0.446 2423 mir-1017 RF02517 7 1.84 71 147 17 0 cm 0.793 0.608 2424 mir-2494 RF02518 10 1.22 117 139 38 0 cm 0.590 0.319 2425 ToxI RF02519 4 4.00 34 48 4 0 cm 1.262 1.190 2426 mir-965 RF02520 32 3.14 105 122 34 0 cm 0.590 0.385 2427 Virus_CITE_7 RF02521 2 0.93 85 102 27 1 cm 0.668 0.379 2428 Virus_CITE_8 RF02522 2 1.17 71 88 21 1 cm 0.793 0.540 2429 ROSE_3 RF02523 16 3.11 69 87 20 1 cm 0.815 0.630 2430 sagA RF02524 6 1.66 161 191 41 3 cm 0.590 0.383 2431 SSRC30 RF02525 3 0.77 151 170 40 2 cm 0.590 0.334 2432 SSRC34 RF02526 16 1.12 128 163 36 1 cm 0.590 0.331 2433 SSRC38 RF02527 3 0.81 166 224 44 3 cm 0.589 0.341 2434 SSRC41 RF02528 8 1.37 111 130 25 1 cm 0.591 0.400 2435 SSRC8 RF02529 3 0.90 150 169 38 1 cm 0.590 0.355 2436 URE2_IRES RF02530 5 1.15 105 123 19 0 cm 0.589 0.434 2437 NRF2_IRES RF02531 20 1.54 128 172 27 3 cm 0.589 0.420 2438 MNV_3UTR RF02532 10 0.74 222 246 74 2 cm 0.590 0.277 2439 HAV_CRE RF02533 2 0.81 114 132 35 0 cm 0.589 0.302 2440 Noro_CRE RF02534 21 3.83 52 67 13 0 cm 1.066 0.936 2441 ODC_IRES RF02535 13 1.55 142 180 33 1 cm 0.590 0.409 2442 AEV_CRE RF02536 2 0.71 135 154 43 0 cm 0.590 0.289 2443 TarA RF02537 2 0.98 99 116 22 2 cm 0.591 0.398 2444 TarB RF02538 2 1.13 79 96 18 3 cm 0.716 0.511 2445 SNOR75 RF02539 6 1.48 88 106 4 0 cm 0.648 0.610 2446 LSU_rRNA_archaea RF02540 91 1.52 2990 3855 786 68 cm 0.590 0.347 2447 LSU_rRNA_bacteria RF02541 102 1.36 2925 3841 846 70 cm 0.590 0.325 2448 SSU_rRNA_microsporidia RF02542 46 1.70 1312 1570 366 26 cm 0.590 0.360 2449 LSU_rRNA_eukarya RF02543 88 2.40 3401 4470 872 71 cm 0.590 0.385 2450 mt-tmRNA RF02544 11 2.22 77 155 19 1 cm 0.734 0.531 #